Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 DUTP2-201ENST00000519164 463 ntBASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 ADM-205ENST00000528544 586 ntTSL 2 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 AL024508.2-201ENST00000607749 1894 ntBASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 AL391005.1-201ENST00000623953 2435 ntBASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 HLA-L-209ENST00000420110 1011 ntBASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 FAM197Y1-201ENST00000421178 764 ntBASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 AC097488.1-201ENST00000507834 756 ntBASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 MIR4674-201ENST00000582457 87 ntBASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms