Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CXCR4P61073 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.97■□□□□ 0.15
CXCR4P61073 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CXCR4P61073 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.97■□□□□ 0.15
CXCR4P61073 AC010240.3-201ENST00000607688 395 ntBASIC15.97■□□□□ 0.15
CXCR4P61073 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CXCR4P61073 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CXCR4P61073 AC008741.2-201ENST00000612792 3115 ntBASIC15.97■□□□□ 0.15
CXCR4P61073 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CXCR4P61073 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CXCR4P61073 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CXCR4P61073 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CXCR4P61073 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CXCR4P61073 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CXCR4P61073 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CXCR4P61073 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CXCR4P61073 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.97■□□□□ 0.15
CXCR4P61073 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CXCR4P61073 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.97■□□□□ 0.15
CXCR4P61073 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CXCR4P61073 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
CXCR4P61073 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CXCR4P61073 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CXCR4P61073 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CXCR4P61073 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CXCR4P61073 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.96■□□□□ 0.15
CXCR4P61073 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.96■□□□□ 0.15
CXCR4P61073 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CXCR4P61073 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CXCR4P61073 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CXCR4P61073 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CXCR4P61073 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CXCR4P61073 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CXCR4P61073 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CXCR4P61073 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CXCR4P61073 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CXCR4P61073 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CXCR4P61073 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.96■□□□□ 0.15
CXCR4P61073 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.96■□□□□ 0.15
CXCR4P61073 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CXCR4P61073 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.96■□□□□ 0.15
CXCR4P61073 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CXCR4P61073 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.96■□□□□ 0.15
CXCR4P61073 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.96■□□□□ 0.15
CXCR4P61073 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.96■□□□□ 0.15
CXCR4P61073 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.96■□□□□ 0.15
CXCR4P61073 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.96■□□□□ 0.15
CXCR4P61073 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
CXCR4P61073 AC116562.4-202ENST00000641738 218 ntBASIC15.96■□□□□ 0.15
CXCR4P61073 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CXCR4P61073 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CXCR4P61073 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CXCR4P61073 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CXCR4P61073 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CXCR4P61073 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CXCR4P61073 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.96■□□□□ 0.15
CXCR4P61073 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CXCR4P61073 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CXCR4P61073 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CXCR4P61073 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CXCR4P61073 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CXCR4P61073 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.96■□□□□ 0.14
CXCR4P61073 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.95■□□□□ 0.14
CXCR4P61073 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.95■□□□□ 0.14
CXCR4P61073 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.95■□□□□ 0.14
CXCR4P61073 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.95■□□□□ 0.14
CXCR4P61073 AC007663.1-201ENST00000438948 1240 ntBASIC15.95■□□□□ 0.14
CXCR4P61073 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.95■□□□□ 0.14
CXCR4P61073 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.95■□□□□ 0.14
CXCR4P61073 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.95■□□□□ 0.14
CXCR4P61073 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.95■□□□□ 0.14
CXCR4P61073 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.95■□□□□ 0.14
CXCR4P61073 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CXCR4P61073 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.95■□□□□ 0.14
CXCR4P61073 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
CXCR4P61073 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CXCR4P61073 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CXCR4P61073 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms