Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CDC34P49427 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.87□□□□□ -0.19
CDC34P49427 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CDC34P49427 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
CDC34P49427 FSCN1P1-201ENST00000568912 1481 ntBASIC13.87□□□□□ -0.19
CDC34P49427 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
CDC34P49427 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 LINC02199-201ENST00000506655 2702 ntBASIC13.86□□□□□ -0.19
CDC34P49427 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.86□□□□□ -0.19
CDC34P49427 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.86□□□□□ -0.19
CDC34P49427 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.86□□□□□ -0.19
CDC34P49427 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 CA15P1-201ENST00000481698 905 ntBASIC13.86□□□□□ -0.19
CDC34P49427 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.86□□□□□ -0.19
CDC34P49427 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.86□□□□□ -0.19
CDC34P49427 RARRES2P10-201ENST00000564312 460 ntBASIC13.86□□□□□ -0.19
CDC34P49427 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 MIR4674-201ENST00000582457 87 ntBASIC13.86□□□□□ -0.19
CDC34P49427 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CDC34P49427 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 TSPY26P-202ENST00000565928 3884 ntBASIC13.86□□□□□ -0.19
CDC34P49427 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
CDC34P49427 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.86□□□□□ -0.19
CDC34P49427 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.86□□□□□ -0.19
CDC34P49427 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CDC34P49427 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CDC34P49427 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.86□□□□□ -0.19
CDC34P49427 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDC34P49427 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CDC34P49427 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CDC34P49427 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CDC34P49427 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.85□□□□□ -0.19
CDC34P49427 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.85□□□□□ -0.19
CDC34P49427 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CDC34P49427 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CDC34P49427 MFAP1P1-201ENST00000442257 1255 ntBASIC13.85□□□□□ -0.19
CDC34P49427 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.85□□□□□ -0.19
CDC34P49427 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.85□□□□□ -0.19
CDC34P49427 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.85□□□□□ -0.19
CDC34P49427 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.85□□□□□ -0.19
CDC34P49427 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.85□□□□□ -0.19
CDC34P49427 AC008687.5-201ENST00000593746 558 ntBASIC13.85□□□□□ -0.19
CDC34P49427 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.85□□□□□ -0.19
CDC34P49427 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.85□□□□□ -0.19
CDC34P49427 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.85□□□□□ -0.19
CDC34P49427 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.85□□□□□ -0.19
CDC34P49427 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CDC34P49427 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.85□□□□□ -0.19
CDC34P49427 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.85□□□□□ -0.19
CDC34P49427 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC13.85□□□□□ -0.19
CDC34P49427 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC34P49427 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDC34P49427 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.84□□□□□ -0.19
CDC34P49427 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDC34P49427 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CDC34P49427 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDC34P49427 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms