Protein–RNA interactions for Protein: P24863

CCNC, Cyclin-C, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNCP24863 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNCP24863 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.81■□□□□ 0.44
CCNCP24863 AC116353.5-201ENST00000638148 1699 ntBASIC17.81■□□□□ 0.44
CCNCP24863 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNCP24863 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNCP24863 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
CCNCP24863 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCNCP24863 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNCP24863 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCNCP24863 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
CCNCP24863 TSPY19P-201ENST00000418461 509 ntBASIC17.81■□□□□ 0.44
CCNCP24863 TSPY18P-201ENST00000441642 509 ntBASIC17.81■□□□□ 0.44
CCNCP24863 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.81■□□□□ 0.44
CCNCP24863 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.81■□□□□ 0.44
CCNCP24863 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.81■□□□□ 0.44
CCNCP24863 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
CCNCP24863 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCNCP24863 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNCP24863 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNCP24863 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNCP24863 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.81■□□□□ 0.44
CCNCP24863 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCNCP24863 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.81■□□□□ 0.44
CCNCP24863 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCNCP24863 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CCNCP24863 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCNCP24863 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNCP24863 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNCP24863 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNCP24863 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNCP24863 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCNCP24863 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCNCP24863 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.8■□□□□ 0.44
CCNCP24863 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CCNCP24863 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.8■□□□□ 0.44
CCNCP24863 KRT18P31-201ENST00000506277 1292 ntBASIC17.8■□□□□ 0.44
CCNCP24863 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCNCP24863 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.8■□□□□ 0.44
CCNCP24863 PRELID1P1-202ENST00000567272 903 ntBASIC17.8■□□□□ 0.44
CCNCP24863 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.8■□□□□ 0.44
CCNCP24863 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.8■□□□□ 0.44
CCNCP24863 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
CCNCP24863 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNCP24863 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.8■□□□□ 0.44
CCNCP24863 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNCP24863 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNCP24863 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCNCP24863 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNCP24863 AP005117.1-201ENST00000584346 1413 ntBASIC17.8■□□□□ 0.44
CCNCP24863 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNCP24863 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.8■□□□□ 0.44
CCNCP24863 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNCP24863 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCNCP24863 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.79■□□□□ 0.44
CCNCP24863 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CCNCP24863 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.79■□□□□ 0.44
CCNCP24863 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 AL020989.1-201ENST00000422979 469 ntBASIC17.79■□□□□ 0.44
CCNCP24863 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.79■□□□□ 0.44
CCNCP24863 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.79■□□□□ 0.44
CCNCP24863 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.79■□□□□ 0.44
CCNCP24863 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 SIGLEC16-201ENST00000599858 1437 ntBASIC17.79■□□□□ 0.44
CCNCP24863 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.79■□□□□ 0.44
CCNCP24863 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.79■□□□□ 0.44
CCNCP24863 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNCP24863 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCNCP24863 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.78■□□□□ 0.44
CCNCP24863 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCNCP24863 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCNCP24863 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCNCP24863 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCNCP24863 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCNCP24863 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCNCP24863 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCNCP24863 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCNCP24863 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCNCP24863 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCNCP24863 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCNCP24863 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.78■□□□□ 0.44
CCNCP24863 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.78■□□□□ 0.44
CCNCP24863 SPDYE21P-201ENST00000413323 827 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms