Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 LINC01003-201ENST00000564834 1764 ntBASIC23.44■■□□□ 1.34
PCDHGA6Q9Y5G7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.43■■□□□ 1.34
PCDHGA6Q9Y5G7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
PCDHGA6Q9Y5G7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.43■■□□□ 1.34
PCDHGA6Q9Y5G7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.43■■□□□ 1.34
PCDHGA6Q9Y5G7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.43■■□□□ 1.34
PCDHGA6Q9Y5G7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGA6Q9Y5G7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.42■■□□□ 1.34
PCDHGA6Q9Y5G7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.42■■□□□ 1.34
PCDHGA6Q9Y5G7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGA6Q9Y5G7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.41■■□□□ 1.34
PCDHGA6Q9Y5G7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGA6Q9Y5G7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGA6Q9Y5G7 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.41■■□□□ 1.34
PCDHGA6Q9Y5G7 AC026202.3-201ENST00000600805 1127 ntBASIC23.41■■□□□ 1.34
PCDHGA6Q9Y5G7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.41■■□□□ 1.34
PCDHGA6Q9Y5G7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGA6Q9Y5G7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGA6Q9Y5G7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGA6Q9Y5G7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGA6Q9Y5G7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
PCDHGA6Q9Y5G7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
PCDHGA6Q9Y5G7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGA6Q9Y5G7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.39■■□□□ 1.34
PCDHGA6Q9Y5G7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGA6Q9Y5G7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGA6Q9Y5G7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
PCDHGA6Q9Y5G7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.39■■□□□ 1.33
PCDHGA6Q9Y5G7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGA6Q9Y5G7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.33
PCDHGA6Q9Y5G7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA6Q9Y5G7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA6Q9Y5G7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.38■■□□□ 1.33
PCDHGA6Q9Y5G7 AP002414.2-202ENST00000590929 1450 ntBASIC23.38■■□□□ 1.33
PCDHGA6Q9Y5G7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.38■■□□□ 1.33
PCDHGA6Q9Y5G7 RP9P-202ENST00000450133 1212 ntBASIC23.38■■□□□ 1.33
PCDHGA6Q9Y5G7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.38■■□□□ 1.33
PCDHGA6Q9Y5G7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.38■■□□□ 1.33
PCDHGA6Q9Y5G7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
PCDHGA6Q9Y5G7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA6Q9Y5G7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA6Q9Y5G7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA6Q9Y5G7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGA6Q9Y5G7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.37■■□□□ 1.33
PCDHGA6Q9Y5G7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGA6Q9Y5G7 RARRES2P1-201ENST00000474487 481 ntBASIC23.37■■□□□ 1.33
PCDHGA6Q9Y5G7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.37■■□□□ 1.33
PCDHGA6Q9Y5G7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
PCDHGA6Q9Y5G7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.37■■□□□ 1.33
PCDHGA6Q9Y5G7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDHGA6Q9Y5G7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
PCDHGA6Q9Y5G7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA6Q9Y5G7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
PCDHGA6Q9Y5G7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA6Q9Y5G7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA6Q9Y5G7 AL449106.1-201ENST00000608517 1980 ntBASIC23.36■■□□□ 1.33
PCDHGA6Q9Y5G7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
PCDHGA6Q9Y5G7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA6Q9Y5G7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
PCDHGA6Q9Y5G7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDHGA6Q9Y5G7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDHGA6Q9Y5G7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA6Q9Y5G7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDHGA6Q9Y5G7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA6Q9Y5G7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA6Q9Y5G7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.34■■□□□ 1.33
PCDHGA6Q9Y5G7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.34■■□□□ 1.33
PCDHGA6Q9Y5G7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA6Q9Y5G7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA6Q9Y5G7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA6Q9Y5G7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.32
PCDHGA6Q9Y5G7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.33■■□□□ 1.32
PCDHGA6Q9Y5G7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
PCDHGA6Q9Y5G7 DUX4L18-201ENST00000553347 1267 ntBASIC23.32■■□□□ 1.32
PCDHGA6Q9Y5G7 AC093536.1-201ENST00000569153 554 ntBASIC23.32■■□□□ 1.32
PCDHGA6Q9Y5G7 RAP2CP1-202ENST00000605179 643 ntBASIC23.32■■□□□ 1.32
PCDHGA6Q9Y5G7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA6Q9Y5G7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDHGA6Q9Y5G7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA6Q9Y5G7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA6Q9Y5G7 MIR3960-201ENST00000583311 91 ntBASIC23.31■■□□□ 1.32
PCDHGA6Q9Y5G7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PCDHGA6Q9Y5G7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.31■■□□□ 1.32
PCDHGA6Q9Y5G7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
PCDHGA6Q9Y5G7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA6Q9Y5G7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.3■■□□□ 1.32
PCDHGA6Q9Y5G7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA6Q9Y5G7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDHGA6Q9Y5G7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGA6Q9Y5G7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
PCDHGA6Q9Y5G7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA6Q9Y5G7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDHGA6Q9Y5G7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHGA6Q9Y5G7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA6Q9Y5G7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA6Q9Y5G7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA6Q9Y5G7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
PCDHGA6Q9Y5G7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHGA6Q9Y5G7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
PCDHGA6Q9Y5G7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms