Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.52■■■□□ 2
KDM3AQ9Y4C1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
KDM3AQ9Y4C1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
KDM3AQ9Y4C1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
KDM3AQ9Y4C1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC27.51■■■□□ 2
KDM3AQ9Y4C1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC27.51■■□□□ 1.99
KDM3AQ9Y4C1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
KDM3AQ9Y4C1 AL033527.3-201ENST00000566366 1196 ntBASIC27.51■■□□□ 1.99
KDM3AQ9Y4C1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
KDM3AQ9Y4C1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.5■■□□□ 1.99
KDM3AQ9Y4C1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.5■■□□□ 1.99
KDM3AQ9Y4C1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
KDM3AQ9Y4C1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
KDM3AQ9Y4C1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.5■■□□□ 1.99
KDM3AQ9Y4C1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.49■■□□□ 1.99
KDM3AQ9Y4C1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
KDM3AQ9Y4C1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC27.48■■□□□ 1.99
KDM3AQ9Y4C1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
KDM3AQ9Y4C1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
KDM3AQ9Y4C1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC27.48■■□□□ 1.99
KDM3AQ9Y4C1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
KDM3AQ9Y4C1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
KDM3AQ9Y4C1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.48■■□□□ 1.99
KDM3AQ9Y4C1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC27.48■■□□□ 1.99
KDM3AQ9Y4C1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
KDM3AQ9Y4C1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
KDM3AQ9Y4C1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
KDM3AQ9Y4C1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
KDM3AQ9Y4C1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
KDM3AQ9Y4C1 TSPY13P-201ENST00000338964 914 ntBASIC27.47■■□□□ 1.99
KDM3AQ9Y4C1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC27.47■■□□□ 1.99
KDM3AQ9Y4C1 AC025884.2-201ENST00000553429 711 ntBASIC27.47■■□□□ 1.99
KDM3AQ9Y4C1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
KDM3AQ9Y4C1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
KDM3AQ9Y4C1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
KDM3AQ9Y4C1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
KDM3AQ9Y4C1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
KDM3AQ9Y4C1 SMPD5-203ENST00000639008 1464 ntBASIC27.47■■□□□ 1.99
KDM3AQ9Y4C1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
KDM3AQ9Y4C1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.46■■□□□ 1.99
KDM3AQ9Y4C1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
KDM3AQ9Y4C1 AC004987.1-201ENST00000428627 508 ntBASIC27.46■■□□□ 1.99
KDM3AQ9Y4C1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC27.46■■□□□ 1.99
KDM3AQ9Y4C1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.46■■□□□ 1.99
KDM3AQ9Y4C1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
KDM3AQ9Y4C1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.46■■□□□ 1.99
KDM3AQ9Y4C1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
KDM3AQ9Y4C1 ATP5G2P3-201ENST00000429083 425 ntBASIC27.45■■□□□ 1.99
KDM3AQ9Y4C1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.45■■□□□ 1.98
KDM3AQ9Y4C1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
KDM3AQ9Y4C1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.45■■□□□ 1.98
KDM3AQ9Y4C1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
KDM3AQ9Y4C1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC27.44■■□□□ 1.98
KDM3AQ9Y4C1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
KDM3AQ9Y4C1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC27.44■■□□□ 1.98
KDM3AQ9Y4C1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
KDM3AQ9Y4C1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
KDM3AQ9Y4C1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
KDM3AQ9Y4C1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
KDM3AQ9Y4C1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
KDM3AQ9Y4C1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
KDM3AQ9Y4C1 GFER-205ENST00000569451 517 ntTSL 5 BASIC27.43■■□□□ 1.98
KDM3AQ9Y4C1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC27.43■■□□□ 1.98
KDM3AQ9Y4C1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
KDM3AQ9Y4C1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC27.43■■□□□ 1.98
KDM3AQ9Y4C1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.43■■□□□ 1.98
KDM3AQ9Y4C1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC27.43■■□□□ 1.98
KDM3AQ9Y4C1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.43■■□□□ 1.98
KDM3AQ9Y4C1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.43■■□□□ 1.98
KDM3AQ9Y4C1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
KDM3AQ9Y4C1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27.42■■□□□ 1.98
KDM3AQ9Y4C1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.41■■□□□ 1.98
KDM3AQ9Y4C1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC27.41■■□□□ 1.98
KDM3AQ9Y4C1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
KDM3AQ9Y4C1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
KDM3AQ9Y4C1 AC009831.1-201ENST00000580420 1582 ntBASIC27.41■■□□□ 1.98
KDM3AQ9Y4C1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
KDM3AQ9Y4C1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
KDM3AQ9Y4C1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
KDM3AQ9Y4C1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC27.4■■□□□ 1.98
KDM3AQ9Y4C1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
KDM3AQ9Y4C1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
KDM3AQ9Y4C1 AC133552.2-201ENST00000619106 1032 ntBASIC27.39■■□□□ 1.97
KDM3AQ9Y4C1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
KDM3AQ9Y4C1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
KDM3AQ9Y4C1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
KDM3AQ9Y4C1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
KDM3AQ9Y4C1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
KDM3AQ9Y4C1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
KDM3AQ9Y4C1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.37■■□□□ 1.97
KDM3AQ9Y4C1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
KDM3AQ9Y4C1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
KDM3AQ9Y4C1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.37■■□□□ 1.97
KDM3AQ9Y4C1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.37■■□□□ 1.97
KDM3AQ9Y4C1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.37■■□□□ 1.97
KDM3AQ9Y4C1 AL592293.1-201ENST00000502889 1188 ntBASIC27.37■■□□□ 1.97
KDM3AQ9Y4C1 AC026202.3-201ENST00000600805 1127 ntBASIC27.37■■□□□ 1.97
KDM3AQ9Y4C1 AC129492.7-201ENST00000622992 756 ntBASIC27.37■■□□□ 1.97
KDM3AQ9Y4C1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
KDM3AQ9Y4C1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms