Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
UBQLN2Q9UHD9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN2Q9UHD9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN2Q9UHD9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBQLN2Q9UHD9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBQLN2Q9UHD9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN2Q9UHD9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN2Q9UHD9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
UBQLN2Q9UHD9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
UBQLN2Q9UHD9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
UBQLN2Q9UHD9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.34■□□□□ 0.85
UBQLN2Q9UHD9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.34■□□□□ 0.85
UBQLN2Q9UHD9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN2Q9UHD9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.34■□□□□ 0.85
UBQLN2Q9UHD9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN2Q9UHD9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN2Q9UHD9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
UBQLN2Q9UHD9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN2Q9UHD9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBQLN2Q9UHD9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBQLN2Q9UHD9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
UBQLN2Q9UHD9 CAHM-201ENST00000604200 896 ntBASIC20.33■□□□□ 0.85
UBQLN2Q9UHD9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.33■□□□□ 0.84
UBQLN2Q9UHD9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN2Q9UHD9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN2Q9UHD9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN2Q9UHD9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.32■□□□□ 0.84
UBQLN2Q9UHD9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN2Q9UHD9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN2Q9UHD9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBQLN2Q9UHD9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
UBQLN2Q9UHD9 AL391121.1-201ENST00000607967 1349 ntBASIC20.31■□□□□ 0.84
UBQLN2Q9UHD9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBQLN2Q9UHD9 AC010864.1-201ENST00000609407 1511 ntBASIC20.31■□□□□ 0.84
UBQLN2Q9UHD9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
UBQLN2Q9UHD9 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.3■□□□□ 0.84
UBQLN2Q9UHD9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.3■□□□□ 0.84
UBQLN2Q9UHD9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.3■□□□□ 0.84
UBQLN2Q9UHD9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBQLN2Q9UHD9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBQLN2Q9UHD9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.29■□□□□ 0.84
UBQLN2Q9UHD9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBQLN2Q9UHD9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBQLN2Q9UHD9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBQLN2Q9UHD9 SUZ12P1-203ENST00000578195 985 ntBASIC20.29■□□□□ 0.84
UBQLN2Q9UHD9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.29■□□□□ 0.84
UBQLN2Q9UHD9 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
UBQLN2Q9UHD9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBQLN2Q9UHD9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBQLN2Q9UHD9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.28■□□□□ 0.84
UBQLN2Q9UHD9 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBQLN2Q9UHD9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN2Q9UHD9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN2Q9UHD9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN2Q9UHD9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN2Q9UHD9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.27■□□□□ 0.84
UBQLN2Q9UHD9 WASH5P-204ENST00000632292 975 ntBASIC20.27■□□□□ 0.84
UBQLN2Q9UHD9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN2Q9UHD9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN2Q9UHD9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
UBQLN2Q9UHD9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN2Q9UHD9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN2Q9UHD9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN2Q9UHD9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.26■□□□□ 0.83
UBQLN2Q9UHD9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.26■□□□□ 0.83
UBQLN2Q9UHD9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN2Q9UHD9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN2Q9UHD9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
UBQLN2Q9UHD9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.26■□□□□ 0.83
UBQLN2Q9UHD9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN2Q9UHD9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
UBQLN2Q9UHD9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.25■□□□□ 0.83
UBQLN2Q9UHD9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN2Q9UHD9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN2Q9UHD9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
UBQLN2Q9UHD9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.25■□□□□ 0.83
UBQLN2Q9UHD9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN2Q9UHD9 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN2Q9UHD9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.24■□□□□ 0.83
UBQLN2Q9UHD9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN2Q9UHD9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN2Q9UHD9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN2Q9UHD9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN2Q9UHD9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.23■□□□□ 0.83
UBQLN2Q9UHD9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN2Q9UHD9 AC138932.3-201ENST00000567634 1902 ntBASIC20.23■□□□□ 0.83
UBQLN2Q9UHD9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
UBQLN2Q9UHD9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN2Q9UHD9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN2Q9UHD9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN2Q9UHD9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN2Q9UHD9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN2Q9UHD9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN2Q9UHD9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN2Q9UHD9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN2Q9UHD9 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN2Q9UHD9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN2Q9UHD9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
UBQLN2Q9UHD9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN2Q9UHD9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms