Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
LRIT1Q9P2V4 KRT8P33-201ENST00000508125 1423 ntBASIC23.71■■□□□ 1.39
LRIT1Q9P2V4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRIT1Q9P2V4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.71■■□□□ 1.39
LRIT1Q9P2V4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.71■■□□□ 1.39
LRIT1Q9P2V4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LRIT1Q9P2V4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRIT1Q9P2V4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LRIT1Q9P2V4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
LRIT1Q9P2V4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRIT1Q9P2V4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRIT1Q9P2V4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRIT1Q9P2V4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRIT1Q9P2V4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRIT1Q9P2V4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRIT1Q9P2V4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRIT1Q9P2V4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
LRIT1Q9P2V4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LRIT1Q9P2V4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.68■■□□□ 1.38
LRIT1Q9P2V4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
LRIT1Q9P2V4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.68■■□□□ 1.38
LRIT1Q9P2V4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.68■■□□□ 1.38
LRIT1Q9P2V4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRIT1Q9P2V4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.68■■□□□ 1.38
LRIT1Q9P2V4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
LRIT1Q9P2V4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRIT1Q9P2V4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRIT1Q9P2V4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LRIT1Q9P2V4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRIT1Q9P2V4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRIT1Q9P2V4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LRIT1Q9P2V4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
LRIT1Q9P2V4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRIT1Q9P2V4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRIT1Q9P2V4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
LRIT1Q9P2V4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.66■■□□□ 1.38
LRIT1Q9P2V4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRIT1Q9P2V4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRIT1Q9P2V4 YBX1P4-201ENST00000392794 808 ntBASIC23.65■■□□□ 1.38
LRIT1Q9P2V4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LRIT1Q9P2V4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.65■■□□□ 1.38
LRIT1Q9P2V4 AL451085.2-201ENST00000605085 799 ntBASIC23.65■■□□□ 1.38
LRIT1Q9P2V4 PVT1_1.1-201ENST00000615125 194 ntBASIC23.65■■□□□ 1.38
LRIT1Q9P2V4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LRIT1Q9P2V4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
LRIT1Q9P2V4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LRIT1Q9P2V4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.64■■□□□ 1.37
LRIT1Q9P2V4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LRIT1Q9P2V4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
LRIT1Q9P2V4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.63■■□□□ 1.37
LRIT1Q9P2V4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
LRIT1Q9P2V4 AL035685.1-201ENST00000636663 812 ntBASIC23.63■■□□□ 1.37
LRIT1Q9P2V4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
LRIT1Q9P2V4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LRIT1Q9P2V4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
LRIT1Q9P2V4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.62■■□□□ 1.37
LRIT1Q9P2V4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.62■■□□□ 1.37
LRIT1Q9P2V4 AC103834.1-201ENST00000520383 144 ntBASIC23.62■■□□□ 1.37
LRIT1Q9P2V4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRIT1Q9P2V4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
LRIT1Q9P2V4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LRIT1Q9P2V4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.61■■□□□ 1.37
LRIT1Q9P2V4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.61■■□□□ 1.37
LRIT1Q9P2V4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.61■■□□□ 1.37
LRIT1Q9P2V4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.61■■□□□ 1.37
LRIT1Q9P2V4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LRIT1Q9P2V4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LRIT1Q9P2V4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
LRIT1Q9P2V4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LRIT1Q9P2V4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.6■■□□□ 1.37
LRIT1Q9P2V4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
LRIT1Q9P2V4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.59■■□□□ 1.37
LRIT1Q9P2V4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.59■■□□□ 1.37
LRIT1Q9P2V4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRIT1Q9P2V4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LRIT1Q9P2V4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
LRIT1Q9P2V4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRIT1Q9P2V4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.58■■□□□ 1.37
LRIT1Q9P2V4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRIT1Q9P2V4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
LRIT1Q9P2V4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
LRIT1Q9P2V4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRIT1Q9P2V4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRIT1Q9P2V4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRIT1Q9P2V4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRIT1Q9P2V4 BX255925.1-201ENST00000566954 1854 ntBASIC23.57■■□□□ 1.36
LRIT1Q9P2V4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LRIT1Q9P2V4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRIT1Q9P2V4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRIT1Q9P2V4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.56■■□□□ 1.36
LRIT1Q9P2V4 MIR4508-201ENST00000584178 70 ntBASIC23.56■■□□□ 1.36
LRIT1Q9P2V4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRIT1Q9P2V4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRIT1Q9P2V4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRIT1Q9P2V4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRIT1Q9P2V4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRIT1Q9P2V4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
LRIT1Q9P2V4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRIT1Q9P2V4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
LRIT1Q9P2V4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms