Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
TFCP2L1Q9NZI6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.51■■■□□ 2.63
TFCP2L1Q9NZI6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TFCP2L1Q9NZI6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.5■■■□□ 2.63
TFCP2L1Q9NZI6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TFCP2L1Q9NZI6 BX664725.1-201ENST00000438252 379 ntBASIC31.5■■■□□ 2.63
TFCP2L1Q9NZI6 KRT16P3-201ENST00000439127 1283 ntBASIC31.5■■■□□ 2.63
TFCP2L1Q9NZI6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC31.49■■■□□ 2.63
TFCP2L1Q9NZI6 AL139246.5-201ENST00000606645 996 ntBASIC31.48■■■□□ 2.63
TFCP2L1Q9NZI6 RPS2P7-201ENST00000447334 885 ntBASIC31.47■■■□□ 2.63
TFCP2L1Q9NZI6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC31.47■■■□□ 2.63
TFCP2L1Q9NZI6 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.47■■■□□ 2.63
TFCP2L1Q9NZI6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TFCP2L1Q9NZI6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.46■■■□□ 2.63
TFCP2L1Q9NZI6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TFCP2L1Q9NZI6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC31.46■■■□□ 2.63
TFCP2L1Q9NZI6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC31.46■■■□□ 2.63
TFCP2L1Q9NZI6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.46■■■□□ 2.63
TFCP2L1Q9NZI6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.45■■■□□ 2.63
TFCP2L1Q9NZI6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
TFCP2L1Q9NZI6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
TFCP2L1Q9NZI6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.45■■■□□ 2.63
TFCP2L1Q9NZI6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.45■■■□□ 2.63
TFCP2L1Q9NZI6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
TFCP2L1Q9NZI6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.44■■■□□ 2.62
TFCP2L1Q9NZI6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TFCP2L1Q9NZI6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TFCP2L1Q9NZI6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TFCP2L1Q9NZI6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC31.44■■■□□ 2.62
TFCP2L1Q9NZI6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC31.44■■■□□ 2.62
TFCP2L1Q9NZI6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
TFCP2L1Q9NZI6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
TFCP2L1Q9NZI6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
TFCP2L1Q9NZI6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
TFCP2L1Q9NZI6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.42■■■□□ 2.62
TFCP2L1Q9NZI6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.42■■■□□ 2.62
TFCP2L1Q9NZI6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TFCP2L1Q9NZI6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
TFCP2L1Q9NZI6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TFCP2L1Q9NZI6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TFCP2L1Q9NZI6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
TFCP2L1Q9NZI6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
TFCP2L1Q9NZI6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TFCP2L1Q9NZI6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
TFCP2L1Q9NZI6 ST7-AS1-201ENST00000456775 1889 ntBASIC31.39■■■□□ 2.62
TFCP2L1Q9NZI6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
TFCP2L1Q9NZI6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC31.38■■■□□ 2.61
TFCP2L1Q9NZI6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC31.38■■■□□ 2.61
TFCP2L1Q9NZI6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
TFCP2L1Q9NZI6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC31.37■■■□□ 2.61
TFCP2L1Q9NZI6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TFCP2L1Q9NZI6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
TFCP2L1Q9NZI6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
TFCP2L1Q9NZI6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
TFCP2L1Q9NZI6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TFCP2L1Q9NZI6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
TFCP2L1Q9NZI6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
TFCP2L1Q9NZI6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TFCP2L1Q9NZI6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TFCP2L1Q9NZI6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
TFCP2L1Q9NZI6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC31.35■■■□□ 2.61
TFCP2L1Q9NZI6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TFCP2L1Q9NZI6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TFCP2L1Q9NZI6 TSPY9P-201ENST00000440215 945 ntBASIC31.35■■■□□ 2.61
TFCP2L1Q9NZI6 TSPY11P-201ENST00000442607 1045 ntBASIC31.35■■■□□ 2.61
TFCP2L1Q9NZI6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.35■■■□□ 2.61
TFCP2L1Q9NZI6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
TFCP2L1Q9NZI6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
TFCP2L1Q9NZI6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC31.34■■■□□ 2.61
TFCP2L1Q9NZI6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC31.34■■■□□ 2.61
TFCP2L1Q9NZI6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.34■■■□□ 2.61
TFCP2L1Q9NZI6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TFCP2L1Q9NZI6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TFCP2L1Q9NZI6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC31.33■■■□□ 2.61
TFCP2L1Q9NZI6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TFCP2L1Q9NZI6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
TFCP2L1Q9NZI6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TFCP2L1Q9NZI6 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TFCP2L1Q9NZI6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TFCP2L1Q9NZI6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
TFCP2L1Q9NZI6 AP002414.2-202ENST00000590929 1450 ntBASIC31.31■■■□□ 2.6
TFCP2L1Q9NZI6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC31.3■■■□□ 2.6
TFCP2L1Q9NZI6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC31.3■■■□□ 2.6
TFCP2L1Q9NZI6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC31.3■■■□□ 2.6
TFCP2L1Q9NZI6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC31.3■■■□□ 2.6
TFCP2L1Q9NZI6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TFCP2L1Q9NZI6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
TFCP2L1Q9NZI6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.29■■■□□ 2.6
TFCP2L1Q9NZI6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC31.29■■■□□ 2.6
TFCP2L1Q9NZI6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TFCP2L1Q9NZI6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC31.28■■■□□ 2.6
TFCP2L1Q9NZI6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.28■■■□□ 2.6
TFCP2L1Q9NZI6 AC022616.5-201ENST00000518796 181 ntBASIC31.28■■■□□ 2.6
TFCP2L1Q9NZI6 AC131281.2-201ENST00000520478 145 ntBASIC31.28■■■□□ 2.6
TFCP2L1Q9NZI6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TFCP2L1Q9NZI6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TFCP2L1Q9NZI6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TFCP2L1Q9NZI6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TFCP2L1Q9NZI6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TFCP2L1Q9NZI6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC31.27■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms