Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ATP13A1Q9HD20 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ATP13A1Q9HD20 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
ATP13A1Q9HD20 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.01■■□□□ 1.59
ATP13A1Q9HD20 NTF6A-201ENST00000591175 560 ntBASIC25.01■■□□□ 1.59
ATP13A1Q9HD20 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
ATP13A1Q9HD20 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
ATP13A1Q9HD20 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ATP13A1Q9HD20 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ATP13A1Q9HD20 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.01■■□□□ 1.59
ATP13A1Q9HD20 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ATP13A1Q9HD20 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
ATP13A1Q9HD20 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ATP13A1Q9HD20 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25■■□□□ 1.59
ATP13A1Q9HD20 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25■■□□□ 1.59
ATP13A1Q9HD20 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
ATP13A1Q9HD20 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25■■□□□ 1.59
ATP13A1Q9HD20 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25■■□□□ 1.59
ATP13A1Q9HD20 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
ATP13A1Q9HD20 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25■■□□□ 1.59
ATP13A1Q9HD20 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ATP13A1Q9HD20 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ATP13A1Q9HD20 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
ATP13A1Q9HD20 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ATP13A1Q9HD20 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ATP13A1Q9HD20 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.99■■□□□ 1.59
ATP13A1Q9HD20 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.99■■□□□ 1.59
ATP13A1Q9HD20 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
ATP13A1Q9HD20 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ATP13A1Q9HD20 AC009831.1-201ENST00000580420 1582 ntBASIC24.99■■□□□ 1.59
ATP13A1Q9HD20 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ATP13A1Q9HD20 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
ATP13A1Q9HD20 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
ATP13A1Q9HD20 AC026202.3-201ENST00000600805 1127 ntBASIC24.98■■□□□ 1.59
ATP13A1Q9HD20 AC133552.2-201ENST00000619106 1032 ntBASIC24.98■■□□□ 1.59
ATP13A1Q9HD20 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.98■■□□□ 1.59
ATP13A1Q9HD20 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.98■■□□□ 1.59
ATP13A1Q9HD20 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
ATP13A1Q9HD20 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.97■■□□□ 1.59
ATP13A1Q9HD20 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.96■■□□□ 1.59
ATP13A1Q9HD20 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATP13A1Q9HD20 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.96■■□□□ 1.59
ATP13A1Q9HD20 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
ATP13A1Q9HD20 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATP13A1Q9HD20 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.96■■□□□ 1.59
ATP13A1Q9HD20 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.95■■□□□ 1.58
ATP13A1Q9HD20 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
ATP13A1Q9HD20 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
ATP13A1Q9HD20 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.95■■□□□ 1.58
ATP13A1Q9HD20 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
ATP13A1Q9HD20 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
ATP13A1Q9HD20 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ATP13A1Q9HD20 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.95■■□□□ 1.58
ATP13A1Q9HD20 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.95■■□□□ 1.58
ATP13A1Q9HD20 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
ATP13A1Q9HD20 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ATP13A1Q9HD20 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ATP13A1Q9HD20 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ATP13A1Q9HD20 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
ATP13A1Q9HD20 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
ATP13A1Q9HD20 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.93■■□□□ 1.58
ATP13A1Q9HD20 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.93■■□□□ 1.58
ATP13A1Q9HD20 RAP2CP1-202ENST00000605179 643 ntBASIC24.93■■□□□ 1.58
ATP13A1Q9HD20 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
ATP13A1Q9HD20 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
ATP13A1Q9HD20 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.92■■□□□ 1.58
ATP13A1Q9HD20 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
ATP13A1Q9HD20 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
ATP13A1Q9HD20 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ATP13A1Q9HD20 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ATP13A1Q9HD20 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ATP13A1Q9HD20 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
ATP13A1Q9HD20 AL592293.1-201ENST00000502889 1188 ntBASIC24.91■■□□□ 1.58
ATP13A1Q9HD20 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
ATP13A1Q9HD20 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
ATP13A1Q9HD20 KRT18P60-201ENST00000312876 1297 ntBASIC24.9■■□□□ 1.58
ATP13A1Q9HD20 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.9■■□□□ 1.58
ATP13A1Q9HD20 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.9■■□□□ 1.58
ATP13A1Q9HD20 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
ATP13A1Q9HD20 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
ATP13A1Q9HD20 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
ATP13A1Q9HD20 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
ATP13A1Q9HD20 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ATP13A1Q9HD20 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.88■■□□□ 1.57
ATP13A1Q9HD20 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ATP13A1Q9HD20 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.88■■□□□ 1.57
ATP13A1Q9HD20 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
ATP13A1Q9HD20 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
ATP13A1Q9HD20 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
ATP13A1Q9HD20 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
ATP13A1Q9HD20 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
ATP13A1Q9HD20 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
ATP13A1Q9HD20 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
ATP13A1Q9HD20 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
ATP13A1Q9HD20 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.86■■□□□ 1.57
ATP13A1Q9HD20 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
ATP13A1Q9HD20 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.85■■□□□ 1.57
ATP13A1Q9HD20 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.85■■□□□ 1.57
ATP13A1Q9HD20 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.85■■□□□ 1.57
ATP13A1Q9HD20 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms