Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
ZFYVE28Q9HCC9 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
ZFYVE28Q9HCC9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
ZFYVE28Q9HCC9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC28.39■■■□□ 2.14
ZFYVE28Q9HCC9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
ZFYVE28Q9HCC9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
ZFYVE28Q9HCC9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
ZFYVE28Q9HCC9 BX664725.1-201ENST00000438252 379 ntBASIC28.38■■■□□ 2.13
ZFYVE28Q9HCC9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
ZFYVE28Q9HCC9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
ZFYVE28Q9HCC9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC28.37■■■□□ 2.13
ZFYVE28Q9HCC9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
ZFYVE28Q9HCC9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
ZFYVE28Q9HCC9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
ZFYVE28Q9HCC9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
ZFYVE28Q9HCC9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
ZFYVE28Q9HCC9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC28.36■■■□□ 2.13
ZFYVE28Q9HCC9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
ZFYVE28Q9HCC9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC28.36■■■□□ 2.13
ZFYVE28Q9HCC9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
ZFYVE28Q9HCC9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
ZFYVE28Q9HCC9 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
ZFYVE28Q9HCC9 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
ZFYVE28Q9HCC9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
ZFYVE28Q9HCC9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
ZFYVE28Q9HCC9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
ZFYVE28Q9HCC9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
ZFYVE28Q9HCC9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC28.34■■■□□ 2.13
ZFYVE28Q9HCC9 ABCB10P3-201ENST00000561950 2166 ntBASIC28.34■■■□□ 2.13
ZFYVE28Q9HCC9 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
ZFYVE28Q9HCC9 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
ZFYVE28Q9HCC9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
ZFYVE28Q9HCC9 MIR638-201ENST00000385237 100 ntBASIC28.33■■■□□ 2.13
ZFYVE28Q9HCC9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC28.33■■■□□ 2.13
ZFYVE28Q9HCC9 KRT16P3-201ENST00000439127 1283 ntBASIC28.32■■■□□ 2.12
ZFYVE28Q9HCC9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC28.32■■■□□ 2.12
ZFYVE28Q9HCC9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC28.32■■■□□ 2.12
ZFYVE28Q9HCC9 UNC93B8-201ENST00000511903 705 ntBASIC28.32■■■□□ 2.12
ZFYVE28Q9HCC9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ZFYVE28Q9HCC9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
ZFYVE28Q9HCC9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ZFYVE28Q9HCC9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
ZFYVE28Q9HCC9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC28.29■■■□□ 2.12
ZFYVE28Q9HCC9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC28.29■■■□□ 2.12
ZFYVE28Q9HCC9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.29■■■□□ 2.12
ZFYVE28Q9HCC9 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
ZFYVE28Q9HCC9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
ZFYVE28Q9HCC9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC28.28■■■□□ 2.12
ZFYVE28Q9HCC9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
ZFYVE28Q9HCC9 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.28■■■□□ 2.12
ZFYVE28Q9HCC9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ZFYVE28Q9HCC9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ZFYVE28Q9HCC9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.27■■■□□ 2.12
ZFYVE28Q9HCC9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
ZFYVE28Q9HCC9 AC022616.5-201ENST00000518796 181 ntBASIC28.27■■■□□ 2.12
ZFYVE28Q9HCC9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC28.27■■■□□ 2.12
ZFYVE28Q9HCC9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ZFYVE28Q9HCC9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ZFYVE28Q9HCC9 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ZFYVE28Q9HCC9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
ZFYVE28Q9HCC9 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ZFYVE28Q9HCC9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ZFYVE28Q9HCC9 WHAMMP3-201ENST00000611636 1609 ntBASIC28.25■■■□□ 2.11
ZFYVE28Q9HCC9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28.25■■■□□ 2.11
ZFYVE28Q9HCC9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ZFYVE28Q9HCC9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC28.25■■■□□ 2.11
ZFYVE28Q9HCC9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
ZFYVE28Q9HCC9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ZFYVE28Q9HCC9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.25■■■□□ 2.11
ZFYVE28Q9HCC9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
ZFYVE28Q9HCC9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC28.24■■■□□ 2.11
ZFYVE28Q9HCC9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC28.24■■■□□ 2.11
ZFYVE28Q9HCC9 AL139246.5-201ENST00000606645 996 ntBASIC28.24■■■□□ 2.11
ZFYVE28Q9HCC9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ZFYVE28Q9HCC9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ZFYVE28Q9HCC9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
ZFYVE28Q9HCC9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
ZFYVE28Q9HCC9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC28.23■■■□□ 2.11
ZFYVE28Q9HCC9 AL139393.2-201ENST00000608721 2025 ntBASIC28.23■■■□□ 2.11
ZFYVE28Q9HCC9 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.22■■■□□ 2.11
ZFYVE28Q9HCC9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ZFYVE28Q9HCC9 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
ZFYVE28Q9HCC9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
ZFYVE28Q9HCC9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC28.21■■■□□ 2.11
ZFYVE28Q9HCC9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC28.21■■■□□ 2.11
ZFYVE28Q9HCC9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC28.21■■■□□ 2.11
ZFYVE28Q9HCC9 RALB-208ENST00000631312 311 ntTSL 5 BASIC28.21■■■□□ 2.11
ZFYVE28Q9HCC9 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ZFYVE28Q9HCC9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ZFYVE28Q9HCC9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
ZFYVE28Q9HCC9 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.2■■■□□ 2.11
ZFYVE28Q9HCC9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ZFYVE28Q9HCC9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.2■■■□□ 2.1
ZFYVE28Q9HCC9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
ZFYVE28Q9HCC9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.2■■■□□ 2.1
ZFYVE28Q9HCC9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
ZFYVE28Q9HCC9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ZFYVE28Q9HCC9 KRT18P24-201ENST00000344739 1156 ntBASIC28.19■■■□□ 2.1
ZFYVE28Q9HCC9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC28.19■■■□□ 2.1
ZFYVE28Q9HCC9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms