Protein–RNA interactions for Protein: Q9H7M6

ZSWIM4, Zinc finger SWIM domain-containing protein 4, humanhuman

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM4Q9H7M6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.48■■□□□ 1.99
ZSWIM4Q9H7M6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
ZSWIM4Q9H7M6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
ZSWIM4Q9H7M6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
ZSWIM4Q9H7M6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
ZSWIM4Q9H7M6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC27.47■■□□□ 1.99
ZSWIM4Q9H7M6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC27.46■■□□□ 1.99
ZSWIM4Q9H7M6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC27.46■■□□□ 1.99
ZSWIM4Q9H7M6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.45■■□□□ 1.99
ZSWIM4Q9H7M6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
ZSWIM4Q9H7M6 AC142472.1-201ENST00000612013 1741 ntBASIC27.45■■□□□ 1.99
ZSWIM4Q9H7M6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
ZSWIM4Q9H7M6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
ZSWIM4Q9H7M6 MIR3960-201ENST00000583311 91 ntBASIC27.45■■□□□ 1.98
ZSWIM4Q9H7M6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
ZSWIM4Q9H7M6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
ZSWIM4Q9H7M6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.44■■□□□ 1.98
ZSWIM4Q9H7M6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27.44■■□□□ 1.98
ZSWIM4Q9H7M6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC27.44■■□□□ 1.98
ZSWIM4Q9H7M6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
ZSWIM4Q9H7M6 AP004609.3-201ENST00000610705 1884 ntBASIC27.44■■□□□ 1.98
ZSWIM4Q9H7M6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ZSWIM4Q9H7M6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
ZSWIM4Q9H7M6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
ZSWIM4Q9H7M6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
ZSWIM4Q9H7M6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC27.43■■□□□ 1.98
ZSWIM4Q9H7M6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
ZSWIM4Q9H7M6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
ZSWIM4Q9H7M6 RP9P-202ENST00000450133 1212 ntBASIC27.43■■□□□ 1.98
ZSWIM4Q9H7M6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
ZSWIM4Q9H7M6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
ZSWIM4Q9H7M6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
ZSWIM4Q9H7M6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27.42■■□□□ 1.98
ZSWIM4Q9H7M6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.42■■□□□ 1.98
ZSWIM4Q9H7M6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
ZSWIM4Q9H7M6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC27.41■■□□□ 1.98
ZSWIM4Q9H7M6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ZSWIM4Q9H7M6 GFER-205ENST00000569451 517 ntTSL 5 BASIC27.41■■□□□ 1.98
ZSWIM4Q9H7M6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ZSWIM4Q9H7M6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.41■■□□□ 1.98
ZSWIM4Q9H7M6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
ZSWIM4Q9H7M6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
ZSWIM4Q9H7M6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
ZSWIM4Q9H7M6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
ZSWIM4Q9H7M6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
ZSWIM4Q9H7M6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
ZSWIM4Q9H7M6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
ZSWIM4Q9H7M6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
ZSWIM4Q9H7M6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.39■■□□□ 1.97
ZSWIM4Q9H7M6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
ZSWIM4Q9H7M6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
ZSWIM4Q9H7M6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
ZSWIM4Q9H7M6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
ZSWIM4Q9H7M6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
ZSWIM4Q9H7M6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
ZSWIM4Q9H7M6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ZSWIM4Q9H7M6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ZSWIM4Q9H7M6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
ZSWIM4Q9H7M6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
ZSWIM4Q9H7M6 AC093536.1-201ENST00000569153 554 ntBASIC27.37■■□□□ 1.97
ZSWIM4Q9H7M6 NTF6A-201ENST00000591175 560 ntBASIC27.37■■□□□ 1.97
ZSWIM4Q9H7M6 U85056.1-201ENST00000616429 682 ntBASIC27.37■■□□□ 1.97
ZSWIM4Q9H7M6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
ZSWIM4Q9H7M6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.37■■□□□ 1.97
ZSWIM4Q9H7M6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ZSWIM4Q9H7M6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.36■■□□□ 1.97
ZSWIM4Q9H7M6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ZSWIM4Q9H7M6 AC026202.3-201ENST00000600805 1127 ntBASIC27.36■■□□□ 1.97
ZSWIM4Q9H7M6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
ZSWIM4Q9H7M6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ZSWIM4Q9H7M6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.36■■□□□ 1.97
ZSWIM4Q9H7M6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.35■■□□□ 1.97
ZSWIM4Q9H7M6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC27.35■■□□□ 1.97
ZSWIM4Q9H7M6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
ZSWIM4Q9H7M6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
ZSWIM4Q9H7M6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ZSWIM4Q9H7M6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ZSWIM4Q9H7M6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ZSWIM4Q9H7M6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ZSWIM4Q9H7M6 AC009831.1-201ENST00000580420 1582 ntBASIC27.34■■□□□ 1.97
ZSWIM4Q9H7M6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZSWIM4Q9H7M6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
ZSWIM4Q9H7M6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ZSWIM4Q9H7M6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ZSWIM4Q9H7M6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ZSWIM4Q9H7M6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.33■■□□□ 1.97
ZSWIM4Q9H7M6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC27.33■■□□□ 1.97
ZSWIM4Q9H7M6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
ZSWIM4Q9H7M6 AC133552.2-201ENST00000619106 1032 ntBASIC27.32■■□□□ 1.96
ZSWIM4Q9H7M6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ZSWIM4Q9H7M6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ZSWIM4Q9H7M6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.31■■□□□ 1.96
ZSWIM4Q9H7M6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC27.31■■□□□ 1.96
ZSWIM4Q9H7M6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
ZSWIM4Q9H7M6 RAP2CP1-202ENST00000605179 643 ntBASIC27.31■■□□□ 1.96
ZSWIM4Q9H7M6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC27.31■■□□□ 1.96
ZSWIM4Q9H7M6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.31■■□□□ 1.96
ZSWIM4Q9H7M6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ZSWIM4Q9H7M6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ZSWIM4Q9H7M6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms