Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.77■■■□□ 2.52
CHMP4BQ9H444 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CHMP4BQ9H444 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
CHMP4BQ9H444 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CHMP4BQ9H444 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CHMP4BQ9H444 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
CHMP4BQ9H444 AC060814.1-201ENST00000554326 538 ntBASIC30.75■■■□□ 2.51
CHMP4BQ9H444 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CHMP4BQ9H444 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
CHMP4BQ9H444 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
CHMP4BQ9H444 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHMP4BQ9H444 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CHMP4BQ9H444 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHMP4BQ9H444 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC30.72■■■□□ 2.51
CHMP4BQ9H444 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CHMP4BQ9H444 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.72■■■□□ 2.51
CHMP4BQ9H444 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
CHMP4BQ9H444 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
CHMP4BQ9H444 MIR4449-201ENST00000578365 66 ntBASIC30.71■■■□□ 2.51
CHMP4BQ9H444 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CHMP4BQ9H444 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CHMP4BQ9H444 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CHMP4BQ9H444 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CHMP4BQ9H444 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CHMP4BQ9H444 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CHMP4BQ9H444 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CHMP4BQ9H444 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC30.68■■■□□ 2.5
CHMP4BQ9H444 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CHMP4BQ9H444 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
CHMP4BQ9H444 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.67■■■□□ 2.5
CHMP4BQ9H444 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.67■■■□□ 2.5
CHMP4BQ9H444 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CHMP4BQ9H444 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CHMP4BQ9H444 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC30.67■■■□□ 2.5
CHMP4BQ9H444 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30.67■■■□□ 2.5
CHMP4BQ9H444 AL157400.5-201ENST00000507624 621 ntBASIC30.67■■■□□ 2.5
CHMP4BQ9H444 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CHMP4BQ9H444 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CHMP4BQ9H444 AC010501.1-201ENST00000606270 1962 ntBASIC30.66■■■□□ 2.5
CHMP4BQ9H444 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CHMP4BQ9H444 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CHMP4BQ9H444 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CHMP4BQ9H444 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CHMP4BQ9H444 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC30.65■■■□□ 2.5
CHMP4BQ9H444 AC025884.2-201ENST00000553429 711 ntBASIC30.65■■■□□ 2.5
CHMP4BQ9H444 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.65■■■□□ 2.5
CHMP4BQ9H444 AC092296.2-201ENST00000589470 999 ntBASIC30.65■■■□□ 2.5
CHMP4BQ9H444 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CHMP4BQ9H444 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
CHMP4BQ9H444 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CHMP4BQ9H444 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CHMP4BQ9H444 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CHMP4BQ9H444 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CHMP4BQ9H444 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CHMP4BQ9H444 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CHMP4BQ9H444 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC30.64■■■□□ 2.5
CHMP4BQ9H444 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CHMP4BQ9H444 AC022413.1-201ENST00000624602 984 ntBASIC30.64■■■□□ 2.5
CHMP4BQ9H444 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CHMP4BQ9H444 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CHMP4BQ9H444 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CHMP4BQ9H444 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
CHMP4BQ9H444 MOB2-207ENST00000614710 705 ntTSL 5 BASIC30.63■■■□□ 2.49
CHMP4BQ9H444 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.62■■■□□ 2.49
CHMP4BQ9H444 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.62■■■□□ 2.49
CHMP4BQ9H444 ECEL1P2-201ENST00000461596 1295 ntBASIC30.62■■■□□ 2.49
CHMP4BQ9H444 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CHMP4BQ9H444 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CHMP4BQ9H444 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC30.62■■■□□ 2.49
CHMP4BQ9H444 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHMP4BQ9H444 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC30.61■■■□□ 2.49
CHMP4BQ9H444 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC30.61■■■□□ 2.49
CHMP4BQ9H444 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHMP4BQ9H444 MIR3960-201ENST00000583311 91 ntBASIC30.61■■■□□ 2.49
CHMP4BQ9H444 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHMP4BQ9H444 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CHMP4BQ9H444 REST-210ENST00000638187 1334 ntTSL 5 BASIC30.61■■■□□ 2.49
CHMP4BQ9H444 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC30.61■■■□□ 2.49
CHMP4BQ9H444 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CHMP4BQ9H444 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
CHMP4BQ9H444 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.6■■■□□ 2.49
CHMP4BQ9H444 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC30.6■■■□□ 2.49
CHMP4BQ9H444 SMPD5-203ENST00000639008 1464 ntBASIC30.6■■■□□ 2.49
CHMP4BQ9H444 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CHMP4BQ9H444 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CHMP4BQ9H444 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CHMP4BQ9H444 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CHMP4BQ9H444 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CHMP4BQ9H444 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
CHMP4BQ9H444 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CHMP4BQ9H444 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CHMP4BQ9H444 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC30.57■■■□□ 2.48
CHMP4BQ9H444 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC30.57■■■□□ 2.48
CHMP4BQ9H444 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CHMP4BQ9H444 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.57■■■□□ 2.48
CHMP4BQ9H444 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
CHMP4BQ9H444 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
CHMP4BQ9H444 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
CHMP4BQ9H444 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CHMP4BQ9H444 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms