Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 AC022616.5-201ENST00000518796 181 ntBASIC24.05■■□□□ 1.44
SPTBN4Q9H254 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
SPTBN4Q9H254 MIR3960-201ENST00000583311 91 ntBASIC24.05■■□□□ 1.44
SPTBN4Q9H254 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SPTBN4Q9H254 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SPTBN4Q9H254 AL031432.3-201ENST00000607698 485 ntBASIC24.04■■□□□ 1.44
SPTBN4Q9H254 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SPTBN4Q9H254 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SPTBN4Q9H254 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.03■■□□□ 1.44
SPTBN4Q9H254 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.03■■□□□ 1.44
SPTBN4Q9H254 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.03■■□□□ 1.44
SPTBN4Q9H254 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SPTBN4Q9H254 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SPTBN4Q9H254 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SPTBN4Q9H254 AC087393.1-201ENST00000582896 145 ntBASIC24.02■■□□□ 1.44
SPTBN4Q9H254 AC092028.1-203ENST00000608262 953 ntBASIC24.02■■□□□ 1.44
SPTBN4Q9H254 AL117332.1-201ENST00000622628 974 ntBASIC24.02■■□□□ 1.44
SPTBN4Q9H254 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SPTBN4Q9H254 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
SPTBN4Q9H254 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SPTBN4Q9H254 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.01■■□□□ 1.43
SPTBN4Q9H254 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SPTBN4Q9H254 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.01■■□□□ 1.43
SPTBN4Q9H254 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SPTBN4Q9H254 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.01■■□□□ 1.43
SPTBN4Q9H254 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SPTBN4Q9H254 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24■■□□□ 1.43
SPTBN4Q9H254 AC097381.1-201ENST00000429019 1296 ntBASIC24■■□□□ 1.43
SPTBN4Q9H254 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24■■□□□ 1.43
SPTBN4Q9H254 RARRES2P11-201ENST00000635158 484 ntBASIC24■■□□□ 1.43
SPTBN4Q9H254 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SPTBN4Q9H254 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.99■■□□□ 1.43
SPTBN4Q9H254 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SPTBN4Q9H254 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.99■■□□□ 1.43
SPTBN4Q9H254 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SPTBN4Q9H254 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SPTBN4Q9H254 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.98■■□□□ 1.43
SPTBN4Q9H254 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SPTBN4Q9H254 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SPTBN4Q9H254 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SPTBN4Q9H254 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.98■■□□□ 1.43
SPTBN4Q9H254 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.98■■□□□ 1.43
SPTBN4Q9H254 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.98■■□□□ 1.43
SPTBN4Q9H254 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.98■■□□□ 1.43
SPTBN4Q9H254 AL512631.2-201ENST00000604634 923 ntBASIC23.98■■□□□ 1.43
SPTBN4Q9H254 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.97■■□□□ 1.43
SPTBN4Q9H254 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SPTBN4Q9H254 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.97■■□□□ 1.43
SPTBN4Q9H254 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.97■■□□□ 1.43
SPTBN4Q9H254 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SPTBN4Q9H254 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.96■■□□□ 1.43
SPTBN4Q9H254 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SPTBN4Q9H254 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SPTBN4Q9H254 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SPTBN4Q9H254 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.96■■□□□ 1.43
SPTBN4Q9H254 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.95■■□□□ 1.42
SPTBN4Q9H254 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SPTBN4Q9H254 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
SPTBN4Q9H254 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.94■■□□□ 1.42
SPTBN4Q9H254 AC021242.3-201ENST00000607598 1377 ntBASIC23.94■■□□□ 1.42
SPTBN4Q9H254 AC137630.3-201ENST00000607245 391 ntBASIC23.94■■□□□ 1.42
SPTBN4Q9H254 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.94■■□□□ 1.42
SPTBN4Q9H254 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
SPTBN4Q9H254 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SPTBN4Q9H254 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SPTBN4Q9H254 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SPTBN4Q9H254 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.94■■□□□ 1.42
SPTBN4Q9H254 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
SPTBN4Q9H254 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.93■■□□□ 1.42
SPTBN4Q9H254 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.93■■□□□ 1.42
SPTBN4Q9H254 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SPTBN4Q9H254 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SPTBN4Q9H254 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.93■■□□□ 1.42
SPTBN4Q9H254 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.93■■□□□ 1.42
SPTBN4Q9H254 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SPTBN4Q9H254 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SPTBN4Q9H254 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SPTBN4Q9H254 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.92■■□□□ 1.42
SPTBN4Q9H254 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
SPTBN4Q9H254 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SPTBN4Q9H254 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.91■■□□□ 1.42
SPTBN4Q9H254 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.91■■□□□ 1.42
SPTBN4Q9H254 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.91■■□□□ 1.42
SPTBN4Q9H254 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.91■■□□□ 1.42
SPTBN4Q9H254 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.9■■□□□ 1.42
SPTBN4Q9H254 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SPTBN4Q9H254 RPS2P7-201ENST00000447334 885 ntBASIC23.9■■□□□ 1.42
SPTBN4Q9H254 PBX2P1-201ENST00000493219 1291 ntBASIC23.9■■□□□ 1.42
SPTBN4Q9H254 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.9■■□□□ 1.42
SPTBN4Q9H254 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.9■■□□□ 1.42
SPTBN4Q9H254 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
SPTBN4Q9H254 AL356740.2-201ENST00000601559 647 ntBASIC23.9■■□□□ 1.42
SPTBN4Q9H254 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.89■■□□□ 1.42
SPTBN4Q9H254 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
SPTBN4Q9H254 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SPTBN4Q9H254 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SPTBN4Q9H254 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SPTBN4Q9H254 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.89■■□□□ 1.41
SPTBN4Q9H254 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SPTBN4Q9H254 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms