Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CDT1Q9H211 ATP5G2P3-201ENST00000429083 425 ntBASIC26.59■■□□□ 1.85
CDT1Q9H211 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.59■■□□□ 1.85
CDT1Q9H211 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
CDT1Q9H211 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
CDT1Q9H211 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDT1Q9H211 SPCS2P3-201ENST00000500401 656 ntBASIC26.58■■□□□ 1.85
CDT1Q9H211 AL033527.3-201ENST00000566366 1196 ntBASIC26.58■■□□□ 1.85
CDT1Q9H211 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
CDT1Q9H211 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDT1Q9H211 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDT1Q9H211 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.57■■□□□ 1.84
CDT1Q9H211 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
CDT1Q9H211 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.57■■□□□ 1.84
CDT1Q9H211 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.57■■□□□ 1.84
CDT1Q9H211 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
CDT1Q9H211 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.57■■□□□ 1.84
CDT1Q9H211 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDT1Q9H211 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CDT1Q9H211 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.56■■□□□ 1.84
CDT1Q9H211 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CDT1Q9H211 TSPY13P-201ENST00000338964 914 ntBASIC26.55■■□□□ 1.84
CDT1Q9H211 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDT1Q9H211 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDT1Q9H211 DUX4L9-201ENST00000449051 1259 ntBASIC26.55■■□□□ 1.84
CDT1Q9H211 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.55■■□□□ 1.84
CDT1Q9H211 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
CDT1Q9H211 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.55■■□□□ 1.84
CDT1Q9H211 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
CDT1Q9H211 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
CDT1Q9H211 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
CDT1Q9H211 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDT1Q9H211 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDT1Q9H211 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDT1Q9H211 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CDT1Q9H211 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
CDT1Q9H211 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.53■■□□□ 1.84
CDT1Q9H211 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CDT1Q9H211 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.53■■□□□ 1.84
CDT1Q9H211 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CDT1Q9H211 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CDT1Q9H211 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.52■■□□□ 1.84
CDT1Q9H211 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
CDT1Q9H211 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CDT1Q9H211 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CDT1Q9H211 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
CDT1Q9H211 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CDT1Q9H211 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
CDT1Q9H211 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CDT1Q9H211 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.51■■□□□ 1.83
CDT1Q9H211 DUX4L18-201ENST00000553347 1267 ntBASIC26.51■■□□□ 1.83
CDT1Q9H211 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CDT1Q9H211 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CDT1Q9H211 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
CDT1Q9H211 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CDT1Q9H211 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CDT1Q9H211 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.5■■□□□ 1.83
CDT1Q9H211 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CDT1Q9H211 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.5■■□□□ 1.83
CDT1Q9H211 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.5■■□□□ 1.83
CDT1Q9H211 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CDT1Q9H211 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CDT1Q9H211 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CDT1Q9H211 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CDT1Q9H211 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.49■■□□□ 1.83
CDT1Q9H211 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CDT1Q9H211 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CDT1Q9H211 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
CDT1Q9H211 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
CDT1Q9H211 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.49■■□□□ 1.83
CDT1Q9H211 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC26.48■■□□□ 1.83
CDT1Q9H211 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CDT1Q9H211 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CDT1Q9H211 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CDT1Q9H211 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CDT1Q9H211 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.47■■□□□ 1.83
CDT1Q9H211 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CDT1Q9H211 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CDT1Q9H211 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CDT1Q9H211 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.47■■□□□ 1.83
CDT1Q9H211 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.47■■□□□ 1.83
CDT1Q9H211 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.46■■□□□ 1.83
CDT1Q9H211 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.46■■□□□ 1.83
CDT1Q9H211 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CDT1Q9H211 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CDT1Q9H211 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CDT1Q9H211 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CDT1Q9H211 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CDT1Q9H211 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CDT1Q9H211 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CDT1Q9H211 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CDT1Q9H211 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.45■■□□□ 1.82
CDT1Q9H211 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
CDT1Q9H211 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.45■■□□□ 1.82
CDT1Q9H211 AL121749.1-202ENST00000609313 2153 ntBASIC26.44■■□□□ 1.82
CDT1Q9H211 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CDT1Q9H211 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CDT1Q9H211 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CDT1Q9H211 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.44■■□□□ 1.82
CDT1Q9H211 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms