Protein–RNA interactions for Protein: Q9C0H5

ARHGAP39, Rho GTPase-activating protein 39, humanhuman

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP39Q9C0H5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC28.17■■■□□ 2.1
ARHGAP39Q9C0H5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC28.17■■■□□ 2.1
ARHGAP39Q9C0H5 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
ARHGAP39Q9C0H5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ARHGAP39Q9C0H5 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ARHGAP39Q9C0H5 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ARHGAP39Q9C0H5 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC28.15■■■□□ 2.1
ARHGAP39Q9C0H5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC28.15■■■□□ 2.1
ARHGAP39Q9C0H5 RPS2P7-201ENST00000447334 885 ntBASIC28.15■■■□□ 2.1
ARHGAP39Q9C0H5 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
ARHGAP39Q9C0H5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ARHGAP39Q9C0H5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
ARHGAP39Q9C0H5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
ARHGAP39Q9C0H5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
ARHGAP39Q9C0H5 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
ARHGAP39Q9C0H5 KRT125P-201ENST00000546827 989 ntBASIC28.14■■■□□ 2.1
ARHGAP39Q9C0H5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC28.14■■■□□ 2.1
ARHGAP39Q9C0H5 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ARHGAP39Q9C0H5 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
ARHGAP39Q9C0H5 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ARHGAP39Q9C0H5 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
ARHGAP39Q9C0H5 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.13■■■□□ 2.09
ARHGAP39Q9C0H5 AP002414.2-202ENST00000590929 1450 ntBASIC28.13■■■□□ 2.09
ARHGAP39Q9C0H5 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ARHGAP39Q9C0H5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
ARHGAP39Q9C0H5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
ARHGAP39Q9C0H5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.11■■■□□ 2.09
ARHGAP39Q9C0H5 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC28.11■■■□□ 2.09
ARHGAP39Q9C0H5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ARHGAP39Q9C0H5 KRT16P3-201ENST00000439127 1283 ntBASIC28.11■■■□□ 2.09
ARHGAP39Q9C0H5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC28.11■■■□□ 2.09
ARHGAP39Q9C0H5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
ARHGAP39Q9C0H5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ARHGAP39Q9C0H5 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ARHGAP39Q9C0H5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ARHGAP39Q9C0H5 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.1■■■□□ 2.09
ARHGAP39Q9C0H5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC28.1■■■□□ 2.09
ARHGAP39Q9C0H5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC28.1■■■□□ 2.09
ARHGAP39Q9C0H5 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.1■■■□□ 2.09
ARHGAP39Q9C0H5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
ARHGAP39Q9C0H5 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ARHGAP39Q9C0H5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ARHGAP39Q9C0H5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC28.09■■■□□ 2.09
ARHGAP39Q9C0H5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC28.09■■■□□ 2.09
ARHGAP39Q9C0H5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ARHGAP39Q9C0H5 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ARHGAP39Q9C0H5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.08■■■□□ 2.09
ARHGAP39Q9C0H5 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
ARHGAP39Q9C0H5 BX664725.1-201ENST00000438252 379 ntBASIC28.08■■■□□ 2.09
ARHGAP39Q9C0H5 RALB-208ENST00000631312 311 ntTSL 5 BASIC28.08■■■□□ 2.09
ARHGAP39Q9C0H5 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ARHGAP39Q9C0H5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.07■■■□□ 2.08
ARHGAP39Q9C0H5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ARHGAP39Q9C0H5 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
ARHGAP39Q9C0H5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ARHGAP39Q9C0H5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC28.07■■■□□ 2.08
ARHGAP39Q9C0H5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC28.07■■■□□ 2.08
ARHGAP39Q9C0H5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
ARHGAP39Q9C0H5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
ARHGAP39Q9C0H5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ARHGAP39Q9C0H5 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
ARHGAP39Q9C0H5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC28.06■■■□□ 2.08
ARHGAP39Q9C0H5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC28.06■■■□□ 2.08
ARHGAP39Q9C0H5 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ARHGAP39Q9C0H5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ARHGAP39Q9C0H5 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.05■■■□□ 2.08
ARHGAP39Q9C0H5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC28.05■■■□□ 2.08
ARHGAP39Q9C0H5 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
ARHGAP39Q9C0H5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
ARHGAP39Q9C0H5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
ARHGAP39Q9C0H5 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
ARHGAP39Q9C0H5 AL139393.2-201ENST00000608721 2025 ntBASIC28.04■■■□□ 2.08
ARHGAP39Q9C0H5 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
ARHGAP39Q9C0H5 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
ARHGAP39Q9C0H5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC28.04■■■□□ 2.08
ARHGAP39Q9C0H5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
ARHGAP39Q9C0H5 AL139246.5-201ENST00000606645 996 ntBASIC28.04■■■□□ 2.08
ARHGAP39Q9C0H5 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
ARHGAP39Q9C0H5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
ARHGAP39Q9C0H5 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
ARHGAP39Q9C0H5 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
ARHGAP39Q9C0H5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC28.03■■■□□ 2.08
ARHGAP39Q9C0H5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC28.03■■■□□ 2.08
ARHGAP39Q9C0H5 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
ARHGAP39Q9C0H5 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.02■■■□□ 2.08
ARHGAP39Q9C0H5 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ARHGAP39Q9C0H5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC28.02■■■□□ 2.08
ARHGAP39Q9C0H5 TSPY9P-201ENST00000440215 945 ntBASIC28.01■■■□□ 2.07
ARHGAP39Q9C0H5 TSPY11P-201ENST00000442607 1045 ntBASIC28.01■■■□□ 2.07
ARHGAP39Q9C0H5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC28.01■■■□□ 2.07
ARHGAP39Q9C0H5 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
ARHGAP39Q9C0H5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC28■■■□□ 2.07
ARHGAP39Q9C0H5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC28■■■□□ 2.07
ARHGAP39Q9C0H5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC28■■■□□ 2.07
ARHGAP39Q9C0H5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC28■■■□□ 2.07
ARHGAP39Q9C0H5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
ARHGAP39Q9C0H5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC27.99■■■□□ 2.07
ARHGAP39Q9C0H5 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.99■■■□□ 2.07
ARHGAP39Q9C0H5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
ARHGAP39Q9C0H5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC27.98■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms