Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
DUX3Q96PT4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.89■□□□□ 0.61
DUX3Q96PT4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
DUX3Q96PT4 SPCS2P3-201ENST00000500401 656 ntBASIC18.89■□□□□ 0.61
DUX3Q96PT4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.89■□□□□ 0.61
DUX3Q96PT4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DUX3Q96PT4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.88■□□□□ 0.61
DUX3Q96PT4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DUX3Q96PT4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DUX3Q96PT4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DUX3Q96PT4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DUX3Q96PT4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DUX3Q96PT4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DUX3Q96PT4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DUX3Q96PT4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DUX3Q96PT4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DUX3Q96PT4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DUX3Q96PT4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.87■□□□□ 0.61
DUX3Q96PT4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DUX3Q96PT4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.87■□□□□ 0.61
DUX3Q96PT4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DUX3Q96PT4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DUX3Q96PT4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
DUX3Q96PT4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
DUX3Q96PT4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUX3Q96PT4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.86■□□□□ 0.61
DUX3Q96PT4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.86■□□□□ 0.61
DUX3Q96PT4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUX3Q96PT4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUX3Q96PT4 BX255925.1-201ENST00000566954 1854 ntBASIC18.86■□□□□ 0.61
DUX3Q96PT4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUX3Q96PT4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DUX3Q96PT4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DUX3Q96PT4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DUX3Q96PT4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DUX3Q96PT4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
DUX3Q96PT4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.85■□□□□ 0.61
DUX3Q96PT4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.85■□□□□ 0.61
DUX3Q96PT4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DUX3Q96PT4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
DUX3Q96PT4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
DUX3Q96PT4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
DUX3Q96PT4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DUX3Q96PT4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DUX3Q96PT4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
DUX3Q96PT4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DUX3Q96PT4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DUX3Q96PT4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DUX3Q96PT4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
DUX3Q96PT4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DUX3Q96PT4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
DUX3Q96PT4 BHLHE23-202ENST00000612929 1109 ntBASIC18.84■□□□□ 0.61
DUX3Q96PT4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
DUX3Q96PT4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.84■□□□□ 0.61
DUX3Q96PT4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
DUX3Q96PT4 AC142086.6-201ENST00000621154 1765 ntBASIC18.83■□□□□ 0.61
DUX3Q96PT4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
DUX3Q96PT4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
DUX3Q96PT4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
DUX3Q96PT4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
DUX3Q96PT4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
DUX3Q96PT4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.82■□□□□ 0.6
DUX3Q96PT4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
DUX3Q96PT4 RARRES2P1-201ENST00000474487 481 ntBASIC18.82■□□□□ 0.6
DUX3Q96PT4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
DUX3Q96PT4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
DUX3Q96PT4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DUX3Q96PT4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
DUX3Q96PT4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DUX3Q96PT4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.81■□□□□ 0.6
DUX3Q96PT4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
DUX3Q96PT4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DUX3Q96PT4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
DUX3Q96PT4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
DUX3Q96PT4 AC010980.1-201ENST00000587192 1142 ntBASIC18.79■□□□□ 0.6
DUX3Q96PT4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.79■□□□□ 0.6
DUX3Q96PT4 MIR6765-201ENST00000614092 87 ntBASIC18.79■□□□□ 0.6
DUX3Q96PT4 AC018755.3-202ENST00000596210 929 ntBASIC18.78■□□□□ 0.6
DUX3Q96PT4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DUX3Q96PT4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.78■□□□□ 0.6
DUX3Q96PT4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DUX3Q96PT4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DUX3Q96PT4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DUX3Q96PT4 AC139795.1-202ENST00000500444 432 ntBASIC18.77■□□□□ 0.6
DUX3Q96PT4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.77■□□□□ 0.6
DUX3Q96PT4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
DUX3Q96PT4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
DUX3Q96PT4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DUX3Q96PT4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.77■□□□□ 0.6
DUX3Q96PT4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
DUX3Q96PT4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
DUX3Q96PT4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
DUX3Q96PT4 KRT8P33-201ENST00000508125 1423 ntBASIC18.76■□□□□ 0.59
DUX3Q96PT4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.76■□□□□ 0.59
DUX3Q96PT4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DUX3Q96PT4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DUX3Q96PT4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
DUX3Q96PT4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.75■□□□□ 0.59
DUX3Q96PT4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
DUX3Q96PT4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms