Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.37■□□□□ 0.85
GAFA1Q96PS6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
GAFA1Q96PS6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GAFA1Q96PS6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GAFA1Q96PS6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
GAFA1Q96PS6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.36■□□□□ 0.85
GAFA1Q96PS6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GAFA1Q96PS6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GAFA1Q96PS6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
GAFA1Q96PS6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GAFA1Q96PS6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
GAFA1Q96PS6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.35■□□□□ 0.85
GAFA1Q96PS6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.35■□□□□ 0.85
GAFA1Q96PS6 RARRES2P2-201ENST00000394842 485 ntBASIC20.35■□□□□ 0.85
GAFA1Q96PS6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.35■□□□□ 0.85
GAFA1Q96PS6 MIR3960-201ENST00000583311 91 ntBASIC20.35■□□□□ 0.85
GAFA1Q96PS6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
GAFA1Q96PS6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GAFA1Q96PS6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.35■□□□□ 0.85
GAFA1Q96PS6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GAFA1Q96PS6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GAFA1Q96PS6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GAFA1Q96PS6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GAFA1Q96PS6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GAFA1Q96PS6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GAFA1Q96PS6 AC007029.1-201ENST00000604183 313 ntBASIC20.34■□□□□ 0.85
GAFA1Q96PS6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
GAFA1Q96PS6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
GAFA1Q96PS6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GAFA1Q96PS6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.33■□□□□ 0.85
GAFA1Q96PS6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.33■□□□□ 0.84
GAFA1Q96PS6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.33■□□□□ 0.84
GAFA1Q96PS6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
GAFA1Q96PS6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GAFA1Q96PS6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GAFA1Q96PS6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GAFA1Q96PS6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GAFA1Q96PS6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GAFA1Q96PS6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GAFA1Q96PS6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GAFA1Q96PS6 RP9P-202ENST00000450133 1212 ntBASIC20.3■□□□□ 0.84
GAFA1Q96PS6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.3■□□□□ 0.84
GAFA1Q96PS6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GAFA1Q96PS6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.3■□□□□ 0.84
GAFA1Q96PS6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.29■□□□□ 0.84
GAFA1Q96PS6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.29■□□□□ 0.84
GAFA1Q96PS6 AC093536.1-201ENST00000569153 554 ntBASIC20.29■□□□□ 0.84
GAFA1Q96PS6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GAFA1Q96PS6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GAFA1Q96PS6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
GAFA1Q96PS6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GAFA1Q96PS6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
GAFA1Q96PS6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
GAFA1Q96PS6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
GAFA1Q96PS6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GAFA1Q96PS6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.28■□□□□ 0.84
GAFA1Q96PS6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GAFA1Q96PS6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
GAFA1Q96PS6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.28■□□□□ 0.84
GAFA1Q96PS6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
GAFA1Q96PS6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.27■□□□□ 0.84
GAFA1Q96PS6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
GAFA1Q96PS6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
GAFA1Q96PS6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
GAFA1Q96PS6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GAFA1Q96PS6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.26■□□□□ 0.83
GAFA1Q96PS6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
GAFA1Q96PS6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.26■□□□□ 0.83
GAFA1Q96PS6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GAFA1Q96PS6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.25■□□□□ 0.83
GAFA1Q96PS6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.25■□□□□ 0.83
GAFA1Q96PS6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GAFA1Q96PS6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GAFA1Q96PS6 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.25■□□□□ 0.83
GAFA1Q96PS6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.24■□□□□ 0.83
GAFA1Q96PS6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GAFA1Q96PS6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.24■□□□□ 0.83
GAFA1Q96PS6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GAFA1Q96PS6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
GAFA1Q96PS6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GAFA1Q96PS6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
GAFA1Q96PS6 AC092803.2-201ENST00000564287 1899 ntBASIC20.23■□□□□ 0.83
GAFA1Q96PS6 AC026202.3-201ENST00000600805 1127 ntBASIC20.23■□□□□ 0.83
GAFA1Q96PS6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
GAFA1Q96PS6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GAFA1Q96PS6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.22■□□□□ 0.83
GAFA1Q96PS6 AC091060.1-201ENST00000623524 1766 ntBASIC20.22■□□□□ 0.83
GAFA1Q96PS6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
GAFA1Q96PS6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GAFA1Q96PS6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.22■□□□□ 0.83
GAFA1Q96PS6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GAFA1Q96PS6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
GAFA1Q96PS6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.22■□□□□ 0.83
GAFA1Q96PS6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GAFA1Q96PS6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GAFA1Q96PS6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
GAFA1Q96PS6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GAFA1Q96PS6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
GAFA1Q96PS6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.21■□□□□ 0.83
GAFA1Q96PS6 RAP2CP1-202ENST00000605179 643 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms