Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
CASD1Q96PB1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
CASD1Q96PB1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CASD1Q96PB1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.41■■□□□ 1.82
CASD1Q96PB1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CASD1Q96PB1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
CASD1Q96PB1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
CASD1Q96PB1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CASD1Q96PB1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CASD1Q96PB1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
CASD1Q96PB1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CASD1Q96PB1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CASD1Q96PB1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CASD1Q96PB1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
CASD1Q96PB1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.39■■□□□ 1.81
CASD1Q96PB1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CASD1Q96PB1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CASD1Q96PB1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CASD1Q96PB1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.38■■□□□ 1.81
CASD1Q96PB1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CASD1Q96PB1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
CASD1Q96PB1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.38■■□□□ 1.81
CASD1Q96PB1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CASD1Q96PB1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CASD1Q96PB1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CASD1Q96PB1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.37■■□□□ 1.81
CASD1Q96PB1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CASD1Q96PB1 AC103724.3-201ENST00000564481 992 ntBASIC26.36■■□□□ 1.81
CASD1Q96PB1 AC087393.1-201ENST00000582896 145 ntBASIC26.36■■□□□ 1.81
CASD1Q96PB1 AC139426.1-201ENST00000568218 2529 ntBASIC26.35■■□□□ 1.81
CASD1Q96PB1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CASD1Q96PB1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
CASD1Q96PB1 AL449106.1-201ENST00000608517 1980 ntBASIC26.35■■□□□ 1.81
CASD1Q96PB1 AC019171.1-201ENST00000601251 1056 ntBASIC26.35■■□□□ 1.81
CASD1Q96PB1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
CASD1Q96PB1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.35■■□□□ 1.81
CASD1Q96PB1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASD1Q96PB1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.34■■□□□ 1.81
CASD1Q96PB1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASD1Q96PB1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.34■■□□□ 1.81
CASD1Q96PB1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CASD1Q96PB1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASD1Q96PB1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CASD1Q96PB1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
CASD1Q96PB1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CASD1Q96PB1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CASD1Q96PB1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.33■■□□□ 1.8
CASD1Q96PB1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.32■■□□□ 1.8
CASD1Q96PB1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CASD1Q96PB1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CASD1Q96PB1 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.32■■□□□ 1.8
CASD1Q96PB1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CASD1Q96PB1 RPS2P7-201ENST00000447334 885 ntBASIC26.31■■□□□ 1.8
CASD1Q96PB1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.31■■□□□ 1.8
CASD1Q96PB1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
CASD1Q96PB1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CASD1Q96PB1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CASD1Q96PB1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CASD1Q96PB1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CASD1Q96PB1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.3■■□□□ 1.8
CASD1Q96PB1 AL031848.2-201ENST00000607670 837 ntBASIC26.3■■□□□ 1.8
CASD1Q96PB1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CASD1Q96PB1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
CASD1Q96PB1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CASD1Q96PB1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CASD1Q96PB1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CASD1Q96PB1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
CASD1Q96PB1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CASD1Q96PB1 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.29■■□□□ 1.8
CASD1Q96PB1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CASD1Q96PB1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CASD1Q96PB1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
CASD1Q96PB1 LINC01003-201ENST00000564834 1764 ntBASIC26.28■■□□□ 1.8
CASD1Q96PB1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.28■■□□□ 1.8
CASD1Q96PB1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CASD1Q96PB1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.28■■□□□ 1.8
CASD1Q96PB1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CASD1Q96PB1 LONRF2P2-201ENST00000439212 571 ntBASIC26.27■■□□□ 1.8
CASD1Q96PB1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.27■■□□□ 1.8
CASD1Q96PB1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.27■■□□□ 1.8
CASD1Q96PB1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CASD1Q96PB1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CASD1Q96PB1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CASD1Q96PB1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CASD1Q96PB1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
CASD1Q96PB1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
CASD1Q96PB1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CASD1Q96PB1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CASD1Q96PB1 GUSBP5-201ENST00000418136 578 ntBASIC26.26■■□□□ 1.79
CASD1Q96PB1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CASD1Q96PB1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
CASD1Q96PB1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CASD1Q96PB1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
CASD1Q96PB1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CASD1Q96PB1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.25■■□□□ 1.79
CASD1Q96PB1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.25■■□□□ 1.79
CASD1Q96PB1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.25■■□□□ 1.79
CASD1Q96PB1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CASD1Q96PB1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
CASD1Q96PB1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms