Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
TRAM1L1Q8N609 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRAM1L1Q8N609 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TRAM1L1Q8N609 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
TRAM1L1Q8N609 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRAM1L1Q8N609 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TRAM1L1Q8N609 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TRAM1L1Q8N609 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
TRAM1L1Q8N609 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.21■■□□□ 1.47
TRAM1L1Q8N609 AC009831.1-201ENST00000580420 1582 ntBASIC24.2■■□□□ 1.47
TRAM1L1Q8N609 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TRAM1L1Q8N609 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRAM1L1Q8N609 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
TRAM1L1Q8N609 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRAM1L1Q8N609 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TRAM1L1Q8N609 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.2■■□□□ 1.46
TRAM1L1Q8N609 RAP2CP1-202ENST00000605179 643 ntBASIC24.2■■□□□ 1.46
TRAM1L1Q8N609 U85056.1-201ENST00000616429 682 ntBASIC24.2■■□□□ 1.46
TRAM1L1Q8N609 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.2■■□□□ 1.46
TRAM1L1Q8N609 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.46
TRAM1L1Q8N609 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TRAM1L1Q8N609 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.19■■□□□ 1.46
TRAM1L1Q8N609 AC133552.2-201ENST00000619106 1032 ntBASIC24.19■■□□□ 1.46
TRAM1L1Q8N609 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
TRAM1L1Q8N609 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRAM1L1Q8N609 NTF6A-201ENST00000591175 560 ntBASIC24.18■■□□□ 1.46
TRAM1L1Q8N609 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TRAM1L1Q8N609 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.18■■□□□ 1.46
TRAM1L1Q8N609 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.18■■□□□ 1.46
TRAM1L1Q8N609 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRAM1L1Q8N609 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.17■■□□□ 1.46
TRAM1L1Q8N609 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRAM1L1Q8N609 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
TRAM1L1Q8N609 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRAM1L1Q8N609 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.17■■□□□ 1.46
TRAM1L1Q8N609 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRAM1L1Q8N609 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRAM1L1Q8N609 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRAM1L1Q8N609 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.15■■□□□ 1.46
TRAM1L1Q8N609 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
TRAM1L1Q8N609 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRAM1L1Q8N609 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
TRAM1L1Q8N609 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRAM1L1Q8N609 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.14■■□□□ 1.45
TRAM1L1Q8N609 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TRAM1L1Q8N609 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRAM1L1Q8N609 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.13■■□□□ 1.45
TRAM1L1Q8N609 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.13■■□□□ 1.45
TRAM1L1Q8N609 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRAM1L1Q8N609 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
TRAM1L1Q8N609 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRAM1L1Q8N609 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRAM1L1Q8N609 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.12■■□□□ 1.45
TRAM1L1Q8N609 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRAM1L1Q8N609 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TRAM1L1Q8N609 AL592293.1-201ENST00000502889 1188 ntBASIC24.12■■□□□ 1.45
TRAM1L1Q8N609 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
TRAM1L1Q8N609 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRAM1L1Q8N609 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TRAM1L1Q8N609 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TRAM1L1Q8N609 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.11■■□□□ 1.45
TRAM1L1Q8N609 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRAM1L1Q8N609 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TRAM1L1Q8N609 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRAM1L1Q8N609 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRAM1L1Q8N609 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TRAM1L1Q8N609 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRAM1L1Q8N609 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
TRAM1L1Q8N609 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRAM1L1Q8N609 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRAM1L1Q8N609 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRAM1L1Q8N609 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.1■■□□□ 1.45
TRAM1L1Q8N609 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRAM1L1Q8N609 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRAM1L1Q8N609 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
TRAM1L1Q8N609 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.1■■□□□ 1.45
TRAM1L1Q8N609 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.1■■□□□ 1.45
TRAM1L1Q8N609 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRAM1L1Q8N609 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TRAM1L1Q8N609 KRT18P60-201ENST00000312876 1297 ntBASIC24.09■■□□□ 1.45
TRAM1L1Q8N609 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
TRAM1L1Q8N609 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.09■■□□□ 1.45
TRAM1L1Q8N609 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TRAM1L1Q8N609 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRAM1L1Q8N609 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
TRAM1L1Q8N609 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.08■■□□□ 1.45
TRAM1L1Q8N609 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
TRAM1L1Q8N609 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRAM1L1Q8N609 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRAM1L1Q8N609 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
TRAM1L1Q8N609 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRAM1L1Q8N609 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRAM1L1Q8N609 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.07■■□□□ 1.44
TRAM1L1Q8N609 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRAM1L1Q8N609 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRAM1L1Q8N609 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TRAM1L1Q8N609 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRAM1L1Q8N609 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TRAM1L1Q8N609 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TRAM1L1Q8N609 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms