Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SYNPOQ8N3V7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SYNPOQ8N3V7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.99■■□□□ 1.59
SYNPOQ8N3V7 AC103724.3-201ENST00000564481 992 ntBASIC24.99■■□□□ 1.59
SYNPOQ8N3V7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
SYNPOQ8N3V7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SYNPOQ8N3V7 THA1P-201ENST00000590384 1145 ntBASIC24.97■■□□□ 1.59
SYNPOQ8N3V7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SYNPOQ8N3V7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
SYNPOQ8N3V7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
SYNPOQ8N3V7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
SYNPOQ8N3V7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.96■■□□□ 1.59
SYNPOQ8N3V7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
SYNPOQ8N3V7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SYNPOQ8N3V7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SYNPOQ8N3V7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.95■■□□□ 1.58
SYNPOQ8N3V7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
SYNPOQ8N3V7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SYNPOQ8N3V7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.95■■□□□ 1.58
SYNPOQ8N3V7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SYNPOQ8N3V7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SYNPOQ8N3V7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SYNPOQ8N3V7 AC019069.1-201ENST00000610008 1333 ntBASIC24.94■■□□□ 1.58
SYNPOQ8N3V7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
SYNPOQ8N3V7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.94■■□□□ 1.58
SYNPOQ8N3V7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
SYNPOQ8N3V7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
SYNPOQ8N3V7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SYNPOQ8N3V7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SYNPOQ8N3V7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
SYNPOQ8N3V7 AC087393.1-201ENST00000582896 145 ntBASIC24.93■■□□□ 1.58
SYNPOQ8N3V7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.93■■□□□ 1.58
SYNPOQ8N3V7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SYNPOQ8N3V7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.92■■□□□ 1.58
SYNPOQ8N3V7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SYNPOQ8N3V7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.92■■□□□ 1.58
SYNPOQ8N3V7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
SYNPOQ8N3V7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SYNPOQ8N3V7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
SYNPOQ8N3V7 WHAMMP3-201ENST00000611636 1609 ntBASIC24.92■■□□□ 1.58
SYNPOQ8N3V7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.92■■□□□ 1.58
SYNPOQ8N3V7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.92■■□□□ 1.58
SYNPOQ8N3V7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.92■■□□□ 1.58
SYNPOQ8N3V7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SYNPOQ8N3V7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
SYNPOQ8N3V7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
SYNPOQ8N3V7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
SYNPOQ8N3V7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.91■■□□□ 1.58
SYNPOQ8N3V7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SYNPOQ8N3V7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SYNPOQ8N3V7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.9■■□□□ 1.58
SYNPOQ8N3V7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.9■■□□□ 1.58
SYNPOQ8N3V7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
SYNPOQ8N3V7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.9■■□□□ 1.58
SYNPOQ8N3V7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.9■■□□□ 1.58
SYNPOQ8N3V7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SYNPOQ8N3V7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SYNPOQ8N3V7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SYNPOQ8N3V7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
SYNPOQ8N3V7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.89■■□□□ 1.58
SYNPOQ8N3V7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.89■■□□□ 1.58
SYNPOQ8N3V7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
SYNPOQ8N3V7 AL356441.2-201ENST00000443009 864 ntBASIC24.88■■□□□ 1.57
SYNPOQ8N3V7 Z92544.1-202ENST00000571933 1220 ntBASIC24.88■■□□□ 1.57
SYNPOQ8N3V7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
SYNPOQ8N3V7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.87■■□□□ 1.57
SYNPOQ8N3V7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.87■■□□□ 1.57
SYNPOQ8N3V7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.87■■□□□ 1.57
SYNPOQ8N3V7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.86■■□□□ 1.57
SYNPOQ8N3V7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.85■■□□□ 1.57
SYNPOQ8N3V7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.85■■□□□ 1.57
SYNPOQ8N3V7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SYNPOQ8N3V7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SYNPOQ8N3V7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SYNPOQ8N3V7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
SYNPOQ8N3V7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.84■■□□□ 1.57
SYNPOQ8N3V7 RPS2P7-201ENST00000447334 885 ntBASIC24.84■■□□□ 1.57
SYNPOQ8N3V7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SYNPOQ8N3V7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.84■■□□□ 1.57
SYNPOQ8N3V7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
SYNPOQ8N3V7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SYNPOQ8N3V7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.83■■□□□ 1.57
SYNPOQ8N3V7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
SYNPOQ8N3V7 LONRF2P2-201ENST00000439212 571 ntBASIC24.83■■□□□ 1.57
SYNPOQ8N3V7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
SYNPOQ8N3V7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SYNPOQ8N3V7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.83■■□□□ 1.57
SYNPOQ8N3V7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.83■■□□□ 1.56
SYNPOQ8N3V7 KRT18P10-201ENST00000388836 1287 ntBASIC24.82■■□□□ 1.56
SYNPOQ8N3V7 AC239859.2-201ENST00000444165 318 ntBASIC24.82■■□□□ 1.56
SYNPOQ8N3V7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
SYNPOQ8N3V7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
SYNPOQ8N3V7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SYNPOQ8N3V7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SYNPOQ8N3V7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.81■■□□□ 1.56
SYNPOQ8N3V7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.81■■□□□ 1.56
SYNPOQ8N3V7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SYNPOQ8N3V7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SYNPOQ8N3V7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.8■■□□□ 1.56
SYNPOQ8N3V7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms