Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC01561Q8N1V8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01561Q8N1V8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
LINC01561Q8N1V8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01561Q8N1V8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LINC01561Q8N1V8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01561Q8N1V8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
LINC01561Q8N1V8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01561Q8N1V8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC16.28■□□□□ 0.2
LINC01561Q8N1V8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.28■□□□□ 0.2
LINC01561Q8N1V8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC16.28■□□□□ 0.2
LINC01561Q8N1V8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01561Q8N1V8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01561Q8N1V8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01561Q8N1V8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
LINC01561Q8N1V8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LINC01561Q8N1V8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01561Q8N1V8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC01561Q8N1V8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01561Q8N1V8 AL162393.1-201ENST00000437852 946 ntBASIC16.27■□□□□ 0.2
LINC01561Q8N1V8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC01561Q8N1V8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC01561Q8N1V8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01561Q8N1V8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01561Q8N1V8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LINC01561Q8N1V8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LINC01561Q8N1V8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01561Q8N1V8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01561Q8N1V8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01561Q8N1V8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC01561Q8N1V8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01561Q8N1V8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC01561Q8N1V8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LINC01561Q8N1V8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01561Q8N1V8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC01561Q8N1V8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01561Q8N1V8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.25■□□□□ 0.19
LINC01561Q8N1V8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01561Q8N1V8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC01561Q8N1V8 AC148477.6-201ENST00000623746 465 ntBASIC16.24■□□□□ 0.19
LINC01561Q8N1V8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01561Q8N1V8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01561Q8N1V8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01561Q8N1V8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
LINC01561Q8N1V8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC16.23■□□□□ 0.19
LINC01561Q8N1V8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LINC01561Q8N1V8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.23■□□□□ 0.19
LINC01561Q8N1V8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01561Q8N1V8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01561Q8N1V8 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC01561Q8N1V8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
LINC01561Q8N1V8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01561Q8N1V8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01561Q8N1V8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01561Q8N1V8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01561Q8N1V8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01561Q8N1V8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01561Q8N1V8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01561Q8N1V8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LINC01561Q8N1V8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC01561Q8N1V8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC01561Q8N1V8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01561Q8N1V8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01561Q8N1V8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.21■□□□□ 0.19
LINC01561Q8N1V8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01561Q8N1V8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01561Q8N1V8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC16.21■□□□□ 0.19
LINC01561Q8N1V8 LINC01971-201ENST00000617888 1048 ntBASIC16.21■□□□□ 0.19
LINC01561Q8N1V8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01561Q8N1V8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
LINC01561Q8N1V8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
LINC01561Q8N1V8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01561Q8N1V8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01561Q8N1V8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC01561Q8N1V8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC01561Q8N1V8 AC022211.4-201ENST00000625094 2161 ntBASIC16.2■□□□□ 0.18
LINC01561Q8N1V8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01561Q8N1V8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01561Q8N1V8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01561Q8N1V8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01561Q8N1V8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01561Q8N1V8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01561Q8N1V8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01561Q8N1V8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01561Q8N1V8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01561Q8N1V8 AC096887.2-201ENST00000623443 1957 ntBASIC16.17■□□□□ 0.18
LINC01561Q8N1V8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01561Q8N1V8 DUX4L13-201ENST00000554103 1267 ntBASIC16.17■□□□□ 0.18
LINC01561Q8N1V8 DUX4L15-201ENST00000611059 1267 ntBASIC16.17■□□□□ 0.18
LINC01561Q8N1V8 DUX4L23-201ENST00000615195 1269 ntBASIC16.17■□□□□ 0.18
LINC01561Q8N1V8 DUX4L24-201ENST00000617576 1269 ntBASIC16.17■□□□□ 0.18
LINC01561Q8N1V8 DUX4L22-201ENST00000618238 1269 ntBASIC16.17■□□□□ 0.18
LINC01561Q8N1V8 DUX4L20-201ENST00000619712 1269 ntBASIC16.17■□□□□ 0.18
LINC01561Q8N1V8 DUX4L21-201ENST00000622058 1269 ntBASIC16.17■□□□□ 0.18
LINC01561Q8N1V8 DUX4L10-201ENST00000622460 1267 ntBASIC16.17■□□□□ 0.18
LINC01561Q8N1V8 DUX4L25-201ENST00000624915 1269 ntBASIC16.17■□□□□ 0.18
LINC01561Q8N1V8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.17■□□□□ 0.18
LINC01561Q8N1V8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01561Q8N1V8 AL139125.2-201ENST00000623134 1869 ntBASIC16.16■□□□□ 0.18
LINC01561Q8N1V8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms