Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.63■■□□□ 1.69
CPNE8Q86YQ8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CPNE8Q86YQ8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
CPNE8Q86YQ8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CPNE8Q86YQ8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CPNE8Q86YQ8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
CPNE8Q86YQ8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CPNE8Q86YQ8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CPNE8Q86YQ8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
CPNE8Q86YQ8 AL359504.2-201ENST00000605506 1601 ntBASIC25.62■■□□□ 1.69
CPNE8Q86YQ8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
CPNE8Q86YQ8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.61■■□□□ 1.69
CPNE8Q86YQ8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
CPNE8Q86YQ8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
CPNE8Q86YQ8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.61■■□□□ 1.69
CPNE8Q86YQ8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CPNE8Q86YQ8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CPNE8Q86YQ8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.6■■□□□ 1.69
CPNE8Q86YQ8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CPNE8Q86YQ8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CPNE8Q86YQ8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CPNE8Q86YQ8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.59■■□□□ 1.69
CPNE8Q86YQ8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CPNE8Q86YQ8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
CPNE8Q86YQ8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CPNE8Q86YQ8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.57■■□□□ 1.68
CPNE8Q86YQ8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CPNE8Q86YQ8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CPNE8Q86YQ8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.57■■□□□ 1.68
CPNE8Q86YQ8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.57■■□□□ 1.68
CPNE8Q86YQ8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CPNE8Q86YQ8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CPNE8Q86YQ8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CPNE8Q86YQ8 MIR7108-201ENST00000614319 87 ntBASIC25.56■■□□□ 1.68
CPNE8Q86YQ8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.56■■□□□ 1.68
CPNE8Q86YQ8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CPNE8Q86YQ8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.56■■□□□ 1.68
CPNE8Q86YQ8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
CPNE8Q86YQ8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.55■■□□□ 1.68
CPNE8Q86YQ8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CPNE8Q86YQ8 AC010501.1-201ENST00000606270 1962 ntBASIC25.55■■□□□ 1.68
CPNE8Q86YQ8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
CPNE8Q86YQ8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CPNE8Q86YQ8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CPNE8Q86YQ8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CPNE8Q86YQ8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
CPNE8Q86YQ8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CPNE8Q86YQ8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.53■■□□□ 1.68
CPNE8Q86YQ8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.53■■□□□ 1.68
CPNE8Q86YQ8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
CPNE8Q86YQ8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.53■■□□□ 1.68
CPNE8Q86YQ8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CPNE8Q86YQ8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CPNE8Q86YQ8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CPNE8Q86YQ8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CPNE8Q86YQ8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CPNE8Q86YQ8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.52■■□□□ 1.68
CPNE8Q86YQ8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CPNE8Q86YQ8 AC096887.2-201ENST00000623443 1957 ntBASIC25.51■■□□□ 1.67
CPNE8Q86YQ8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CPNE8Q86YQ8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CPNE8Q86YQ8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
CPNE8Q86YQ8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
CPNE8Q86YQ8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CPNE8Q86YQ8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CPNE8Q86YQ8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.48■■□□□ 1.67
CPNE8Q86YQ8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.48■■□□□ 1.67
CPNE8Q86YQ8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
CPNE8Q86YQ8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
CPNE8Q86YQ8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CPNE8Q86YQ8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
CPNE8Q86YQ8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
CPNE8Q86YQ8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.48■■□□□ 1.67
CPNE8Q86YQ8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CPNE8Q86YQ8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
CPNE8Q86YQ8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
CPNE8Q86YQ8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CPNE8Q86YQ8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CPNE8Q86YQ8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CPNE8Q86YQ8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CPNE8Q86YQ8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CPNE8Q86YQ8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
CPNE8Q86YQ8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CPNE8Q86YQ8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
CPNE8Q86YQ8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CPNE8Q86YQ8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CPNE8Q86YQ8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CPNE8Q86YQ8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CPNE8Q86YQ8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.44■■□□□ 1.66
CPNE8Q86YQ8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CPNE8Q86YQ8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CPNE8Q86YQ8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CPNE8Q86YQ8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CPNE8Q86YQ8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CPNE8Q86YQ8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
CPNE8Q86YQ8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CPNE8Q86YQ8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
CPNE8Q86YQ8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CPNE8Q86YQ8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.42■■□□□ 1.66
CPNE8Q86YQ8 AL157400.5-201ENST00000507624 621 ntBASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms