Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC31.33■■■□□ 2.61
COL23A1Q86Y22 RPS2P7-201ENST00000447334 885 ntBASIC31.33■■■□□ 2.61
COL23A1Q86Y22 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC31.33■■■□□ 2.61
COL23A1Q86Y22 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
COL23A1Q86Y22 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
COL23A1Q86Y22 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
COL23A1Q86Y22 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
COL23A1Q86Y22 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
COL23A1Q86Y22 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC31.32■■■□□ 2.6
COL23A1Q86Y22 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
COL23A1Q86Y22 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
COL23A1Q86Y22 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
COL23A1Q86Y22 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
COL23A1Q86Y22 AL139246.5-201ENST00000606645 996 ntBASIC31.31■■■□□ 2.6
COL23A1Q86Y22 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.31■■■□□ 2.6
COL23A1Q86Y22 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.31■■■□□ 2.6
COL23A1Q86Y22 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
COL23A1Q86Y22 KRT16P3-201ENST00000439127 1283 ntBASIC31.3■■■□□ 2.6
COL23A1Q86Y22 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
COL23A1Q86Y22 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.3■■■□□ 2.6
COL23A1Q86Y22 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.3■■■□□ 2.6
COL23A1Q86Y22 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
COL23A1Q86Y22 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
COL23A1Q86Y22 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
COL23A1Q86Y22 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
COL23A1Q86Y22 BX664725.1-201ENST00000438252 379 ntBASIC31.28■■■□□ 2.6
COL23A1Q86Y22 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.28■■■□□ 2.6
COL23A1Q86Y22 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
COL23A1Q86Y22 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.27■■■□□ 2.6
COL23A1Q86Y22 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.27■■■□□ 2.6
COL23A1Q86Y22 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
COL23A1Q86Y22 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
COL23A1Q86Y22 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
COL23A1Q86Y22 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
COL23A1Q86Y22 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC31.26■■■□□ 2.59
COL23A1Q86Y22 NALT1-201ENST00000429224 738 ntTSL 5 BASIC31.25■■■□□ 2.59
COL23A1Q86Y22 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC31.25■■■□□ 2.59
COL23A1Q86Y22 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
COL23A1Q86Y22 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC31.25■■■□□ 2.59
COL23A1Q86Y22 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
COL23A1Q86Y22 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
COL23A1Q86Y22 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC31.24■■■□□ 2.59
COL23A1Q86Y22 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.24■■■□□ 2.59
COL23A1Q86Y22 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
COL23A1Q86Y22 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
COL23A1Q86Y22 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC31.23■■■□□ 2.59
COL23A1Q86Y22 AP002414.2-202ENST00000590929 1450 ntBASIC31.22■■■□□ 2.59
COL23A1Q86Y22 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
COL23A1Q86Y22 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
COL23A1Q86Y22 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
COL23A1Q86Y22 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
COL23A1Q86Y22 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
COL23A1Q86Y22 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
COL23A1Q86Y22 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
COL23A1Q86Y22 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.2■■■□□ 2.58
COL23A1Q86Y22 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.2■■■□□ 2.58
COL23A1Q86Y22 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
COL23A1Q86Y22 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC31.19■■■□□ 2.58
COL23A1Q86Y22 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC31.19■■■□□ 2.58
COL23A1Q86Y22 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
COL23A1Q86Y22 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
COL23A1Q86Y22 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
COL23A1Q86Y22 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
COL23A1Q86Y22 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
COL23A1Q86Y22 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
COL23A1Q86Y22 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
COL23A1Q86Y22 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
COL23A1Q86Y22 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC31.17■■■□□ 2.58
COL23A1Q86Y22 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
COL23A1Q86Y22 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC31.17■■■□□ 2.58
COL23A1Q86Y22 ABCB10P3-201ENST00000561950 2166 ntBASIC31.17■■■□□ 2.58
COL23A1Q86Y22 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
COL23A1Q86Y22 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
COL23A1Q86Y22 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
COL23A1Q86Y22 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC31.16■■■□□ 2.58
COL23A1Q86Y22 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC31.16■■■□□ 2.58
COL23A1Q86Y22 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC31.16■■■□□ 2.58
COL23A1Q86Y22 TRIR-202ENST00000588213 841 ntTSL 3 BASIC31.16■■■□□ 2.58
COL23A1Q86Y22 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC31.16■■■□□ 2.58
COL23A1Q86Y22 AC131281.2-201ENST00000520478 145 ntBASIC31.15■■■□□ 2.58
COL23A1Q86Y22 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
COL23A1Q86Y22 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
COL23A1Q86Y22 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
COL23A1Q86Y22 TSPY9P-201ENST00000440215 945 ntBASIC31.14■■■□□ 2.58
COL23A1Q86Y22 TSPY11P-201ENST00000442607 1045 ntBASIC31.14■■■□□ 2.58
COL23A1Q86Y22 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.14■■■□□ 2.58
COL23A1Q86Y22 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.14■■■□□ 2.58
COL23A1Q86Y22 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
COL23A1Q86Y22 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
COL23A1Q86Y22 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.13■■■□□ 2.57
COL23A1Q86Y22 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
COL23A1Q86Y22 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
COL23A1Q86Y22 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
COL23A1Q86Y22 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC31.12■■■□□ 2.57
COL23A1Q86Y22 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
COL23A1Q86Y22 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
COL23A1Q86Y22 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
COL23A1Q86Y22 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC31.11■■■□□ 2.57
COL23A1Q86Y22 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC31.11■■■□□ 2.57
COL23A1Q86Y22 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC31.11■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms