Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC31.33■■■□□ 2.61
COL23A1Q86Y22 RPS2P7-201ENST00000447334 885 ntBASIC31.33■■■□□ 2.61
COL23A1Q86Y22 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC31.33■■■□□ 2.61
COL23A1Q86Y22 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
COL23A1Q86Y22 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
COL23A1Q86Y22 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
COL23A1Q86Y22 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
COL23A1Q86Y22 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
COL23A1Q86Y22 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC31.32■■■□□ 2.6
COL23A1Q86Y22 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
COL23A1Q86Y22 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
COL23A1Q86Y22 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
COL23A1Q86Y22 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
COL23A1Q86Y22 AL139246.5-201ENST00000606645 996 ntBASIC31.31■■■□□ 2.6
COL23A1Q86Y22 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.31■■■□□ 2.6
COL23A1Q86Y22 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.31■■■□□ 2.6
COL23A1Q86Y22 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
COL23A1Q86Y22 KRT16P3-201ENST00000439127 1283 ntBASIC31.3■■■□□ 2.6
COL23A1Q86Y22 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
COL23A1Q86Y22 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.3■■■□□ 2.6
COL23A1Q86Y22 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.3■■■□□ 2.6
COL23A1Q86Y22 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
COL23A1Q86Y22 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
COL23A1Q86Y22 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
COL23A1Q86Y22 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
COL23A1Q86Y22 BX664725.1-201ENST00000438252 379 ntBASIC31.28■■■□□ 2.6
COL23A1Q86Y22 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.28■■■□□ 2.6
COL23A1Q86Y22 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
COL23A1Q86Y22 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.27■■■□□ 2.6
COL23A1Q86Y22 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.27■■■□□ 2.6
COL23A1Q86Y22 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
COL23A1Q86Y22 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
COL23A1Q86Y22 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
COL23A1Q86Y22 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
COL23A1Q86Y22 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC31.26■■■□□ 2.59
COL23A1Q86Y22 NALT1-201ENST00000429224 738 ntTSL 5 BASIC31.25■■■□□ 2.59
COL23A1Q86Y22 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC31.25■■■□□ 2.59
COL23A1Q86Y22 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
COL23A1Q86Y22 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC31.25■■■□□ 2.59
COL23A1Q86Y22 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
COL23A1Q86Y22 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
COL23A1Q86Y22 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC31.24■■■□□ 2.59
COL23A1Q86Y22 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.24■■■□□ 2.59
COL23A1Q86Y22 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
COL23A1Q86Y22 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
COL23A1Q86Y22 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC31.23■■■□□ 2.59
COL23A1Q86Y22 AP002414.2-202ENST00000590929 1450 ntBASIC31.22■■■□□ 2.59
COL23A1Q86Y22 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
COL23A1Q86Y22 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
COL23A1Q86Y22 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
COL23A1Q86Y22 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
COL23A1Q86Y22 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
COL23A1Q86Y22 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
COL23A1Q86Y22 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
COL23A1Q86Y22 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.2■■■□□ 2.58
COL23A1Q86Y22 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.2■■■□□ 2.58
COL23A1Q86Y22 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
COL23A1Q86Y22 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC31.19■■■□□ 2.58
COL23A1Q86Y22 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC31.19■■■□□ 2.58
COL23A1Q86Y22 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
COL23A1Q86Y22 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
COL23A1Q86Y22 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
COL23A1Q86Y22 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
COL23A1Q86Y22 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
COL23A1Q86Y22 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
COL23A1Q86Y22 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
COL23A1Q86Y22 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
COL23A1Q86Y22 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC31.17■■■□□ 2.58
COL23A1Q86Y22 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
COL23A1Q86Y22 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC31.17■■■□□ 2.58
COL23A1Q86Y22 ABCB10P3-201ENST00000561950 2166 ntBASIC31.17■■■□□ 2.58
COL23A1Q86Y22 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
COL23A1Q86Y22 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
COL23A1Q86Y22 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
COL23A1Q86Y22 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC31.16■■■□□ 2.58
COL23A1Q86Y22 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC31.16■■■□□ 2.58
COL23A1Q86Y22 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC31.16■■■□□ 2.58
COL23A1Q86Y22 TRIR-202ENST00000588213 841 ntTSL 3 BASIC31.16■■■□□ 2.58
COL23A1Q86Y22 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC31.16■■■□□ 2.58
COL23A1Q86Y22 AC131281.2-201ENST00000520478 145 ntBASIC31.15■■■□□ 2.58
COL23A1Q86Y22 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
COL23A1Q86Y22 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
COL23A1Q86Y22 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
COL23A1Q86Y22 TSPY9P-201ENST00000440215 945 ntBASIC31.14■■■□□ 2.58
COL23A1Q86Y22 TSPY11P-201ENST00000442607 1045 ntBASIC31.14■■■□□ 2.58
COL23A1Q86Y22 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.14■■■□□ 2.58
COL23A1Q86Y22 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.14■■■□□ 2.58
COL23A1Q86Y22 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
COL23A1Q86Y22 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
COL23A1Q86Y22 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.13■■■□□ 2.57
COL23A1Q86Y22 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
COL23A1Q86Y22 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
COL23A1Q86Y22 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
COL23A1Q86Y22 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC31.12■■■□□ 2.57
COL23A1Q86Y22 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
COL23A1Q86Y22 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
COL23A1Q86Y22 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
COL23A1Q86Y22 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC31.11■■■□□ 2.57
COL23A1Q86Y22 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC31.11■■■□□ 2.57
COL23A1Q86Y22 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC31.11■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms