Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
FOXR1Q6PIV2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
FOXR1Q6PIV2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
FOXR1Q6PIV2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
FOXR1Q6PIV2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.19■■□□□ 1.62
FOXR1Q6PIV2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.19■■□□□ 1.62
FOXR1Q6PIV2 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.19■■□□□ 1.62
FOXR1Q6PIV2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
FOXR1Q6PIV2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
FOXR1Q6PIV2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
FOXR1Q6PIV2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
FOXR1Q6PIV2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
FOXR1Q6PIV2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
FOXR1Q6PIV2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.18■■□□□ 1.62
FOXR1Q6PIV2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
FOXR1Q6PIV2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
FOXR1Q6PIV2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.17■■□□□ 1.62
FOXR1Q6PIV2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.17■■□□□ 1.62
FOXR1Q6PIV2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
FOXR1Q6PIV2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
FOXR1Q6PIV2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
FOXR1Q6PIV2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
FOXR1Q6PIV2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
FOXR1Q6PIV2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
FOXR1Q6PIV2 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
FOXR1Q6PIV2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
FOXR1Q6PIV2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.15■■□□□ 1.62
FOXR1Q6PIV2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
FOXR1Q6PIV2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
FOXR1Q6PIV2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.15■■□□□ 1.62
FOXR1Q6PIV2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
FOXR1Q6PIV2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.15■■□□□ 1.62
FOXR1Q6PIV2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
FOXR1Q6PIV2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
FOXR1Q6PIV2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
FOXR1Q6PIV2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.14■■□□□ 1.62
FOXR1Q6PIV2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
FOXR1Q6PIV2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
FOXR1Q6PIV2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
FOXR1Q6PIV2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
FOXR1Q6PIV2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.13■■□□□ 1.61
FOXR1Q6PIV2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
FOXR1Q6PIV2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
FOXR1Q6PIV2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
FOXR1Q6PIV2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.12■■□□□ 1.61
FOXR1Q6PIV2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
FOXR1Q6PIV2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.12■■□□□ 1.61
FOXR1Q6PIV2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
FOXR1Q6PIV2 AC010864.1-201ENST00000609407 1511 ntBASIC25.12■■□□□ 1.61
FOXR1Q6PIV2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.11■■□□□ 1.61
FOXR1Q6PIV2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
FOXR1Q6PIV2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
FOXR1Q6PIV2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.11■■□□□ 1.61
FOXR1Q6PIV2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
FOXR1Q6PIV2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
FOXR1Q6PIV2 AC092803.2-201ENST00000564287 1899 ntBASIC25.1■■□□□ 1.61
FOXR1Q6PIV2 CLDN5-201ENST00000403084 2357 ntBASIC25.1■■□□□ 1.61
FOXR1Q6PIV2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.1■■□□□ 1.61
FOXR1Q6PIV2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
FOXR1Q6PIV2 AC012676.1-201ENST00000574705 1949 ntBASIC25.09■■□□□ 1.61
FOXR1Q6PIV2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.08■■□□□ 1.61
FOXR1Q6PIV2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.08■■□□□ 1.6
FOXR1Q6PIV2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.08■■□□□ 1.6
FOXR1Q6PIV2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
FOXR1Q6PIV2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.07■■□□□ 1.6
FOXR1Q6PIV2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
FOXR1Q6PIV2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
FOXR1Q6PIV2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
FOXR1Q6PIV2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
FOXR1Q6PIV2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
FOXR1Q6PIV2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
FOXR1Q6PIV2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
FOXR1Q6PIV2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
FOXR1Q6PIV2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
FOXR1Q6PIV2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
FOXR1Q6PIV2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
FOXR1Q6PIV2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
FOXR1Q6PIV2 AP004833.2-201ENST00000532228 1454 ntBASIC25.06■■□□□ 1.6
FOXR1Q6PIV2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
FOXR1Q6PIV2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
FOXR1Q6PIV2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
FOXR1Q6PIV2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
FOXR1Q6PIV2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.04■■□□□ 1.6
FOXR1Q6PIV2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.04■■□□□ 1.6
FOXR1Q6PIV2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
FOXR1Q6PIV2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
FOXR1Q6PIV2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
FOXR1Q6PIV2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
FOXR1Q6PIV2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
FOXR1Q6PIV2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
FOXR1Q6PIV2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
FOXR1Q6PIV2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
FOXR1Q6PIV2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
FOXR1Q6PIV2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
FOXR1Q6PIV2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
FOXR1Q6PIV2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.01■■□□□ 1.59
FOXR1Q6PIV2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
FOXR1Q6PIV2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
FOXR1Q6PIV2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.01■■□□□ 1.59
FOXR1Q6PIV2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms