Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 ANKRD20A6P-201ENST00000618763 204 ntBASIC29.31■■■□□ 2.28
HTRA3P83110 AL117332.1-201ENST00000622628 974 ntBASIC29.31■■■□□ 2.28
HTRA3P83110 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
HTRA3P83110 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
HTRA3P83110 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC29.3■■■□□ 2.28
HTRA3P83110 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC29.3■■■□□ 2.28
HTRA3P83110 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.3■■■□□ 2.28
HTRA3P83110 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
HTRA3P83110 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC29.29■■■□□ 2.28
HTRA3P83110 AC142381.2-201ENST00000566120 298 ntBASIC29.29■■■□□ 2.28
HTRA3P83110 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
HTRA3P83110 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
HTRA3P83110 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
HTRA3P83110 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
HTRA3P83110 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
HTRA3P83110 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
HTRA3P83110 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.28
HTRA3P83110 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
HTRA3P83110 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC29.26■■■□□ 2.27
HTRA3P83110 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
HTRA3P83110 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC29.26■■■□□ 2.27
HTRA3P83110 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
HTRA3P83110 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
HTRA3P83110 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC29.25■■■□□ 2.27
HTRA3P83110 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC29.25■■■□□ 2.27
HTRA3P83110 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
HTRA3P83110 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.24■■■□□ 2.27
HTRA3P83110 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
HTRA3P83110 TK2-202ENST00000417693 1046 ntTSL 2 BASIC29.23■■■□□ 2.27
HTRA3P83110 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC29.23■■■□□ 2.27
HTRA3P83110 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC29.23■■■□□ 2.27
HTRA3P83110 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC29.22■■■□□ 2.27
HTRA3P83110 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC29.22■■■□□ 2.27
HTRA3P83110 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC29.22■■■□□ 2.27
HTRA3P83110 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
HTRA3P83110 MIR3621-201ENST00000580529 85 ntBASIC29.21■■■□□ 2.27
HTRA3P83110 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
HTRA3P83110 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
HTRA3P83110 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC29.21■■■□□ 2.27
HTRA3P83110 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC29.2■■■□□ 2.26
HTRA3P83110 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC29.2■■■□□ 2.26
HTRA3P83110 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
HTRA3P83110 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
HTRA3P83110 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
HTRA3P83110 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
HTRA3P83110 AC021242.3-201ENST00000607598 1377 ntBASIC29.18■■■□□ 2.26
HTRA3P83110 PBX2P1-201ENST00000493219 1291 ntBASIC29.18■■■□□ 2.26
HTRA3P83110 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
HTRA3P83110 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
HTRA3P83110 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC29.17■■■□□ 2.26
HTRA3P83110 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
HTRA3P83110 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.17■■■□□ 2.26
HTRA3P83110 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
HTRA3P83110 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
HTRA3P83110 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
HTRA3P83110 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
HTRA3P83110 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC29.16■■■□□ 2.26
HTRA3P83110 AC092028.1-203ENST00000608262 953 ntBASIC29.16■■■□□ 2.26
HTRA3P83110 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
HTRA3P83110 GLI3-203ENST00000437480 451 ntTSL 2 BASIC29.15■■■□□ 2.26
HTRA3P83110 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
HTRA3P83110 AC137630.3-201ENST00000607245 391 ntBASIC29.14■■■□□ 2.26
HTRA3P83110 AC106739.1-201ENST00000617035 715 ntBASIC29.14■■■□□ 2.26
HTRA3P83110 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
HTRA3P83110 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC29.13■■■□□ 2.25
HTRA3P83110 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
HTRA3P83110 RPS2P7-201ENST00000447334 885 ntBASIC29.13■■■□□ 2.25
HTRA3P83110 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC29.13■■■□□ 2.25
HTRA3P83110 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC29.13■■■□□ 2.25
HTRA3P83110 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC29.12■■■□□ 2.25
HTRA3P83110 AC090192.1-201ENST00000517740 490 ntBASIC29.12■■■□□ 2.25
HTRA3P83110 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
HTRA3P83110 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
HTRA3P83110 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
HTRA3P83110 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
HTRA3P83110 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC29.11■■■□□ 2.25
HTRA3P83110 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC29.11■■■□□ 2.25
HTRA3P83110 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC29.11■■■□□ 2.25
HTRA3P83110 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC29.11■■■□□ 2.25
HTRA3P83110 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
HTRA3P83110 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
HTRA3P83110 AL162430.1-201ENST00000480705 870 ntBASIC29.1■■■□□ 2.25
HTRA3P83110 QDPR-206ENST00000508623 601 ntTSL 3 BASIC29.1■■■□□ 2.25
HTRA3P83110 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC29.1■■■□□ 2.25
HTRA3P83110 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
HTRA3P83110 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.1■■■□□ 2.25
HTRA3P83110 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
HTRA3P83110 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
HTRA3P83110 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC29.09■■■□□ 2.25
HTRA3P83110 AL031432.3-201ENST00000607698 485 ntBASIC29.09■■■□□ 2.25
HTRA3P83110 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
HTRA3P83110 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
HTRA3P83110 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
HTRA3P83110 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC29.08■■■□□ 2.25
HTRA3P83110 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
HTRA3P83110 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC29.08■■■□□ 2.25
HTRA3P83110 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
HTRA3P83110 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
HTRA3P83110 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC29.07■■■□□ 2.24
HTRA3P83110 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms