Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
HIST1H3AP68431 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HIST1H3AP68431 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HIST1H3AP68431 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HIST1H3AP68431 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
HIST1H3AP68431 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HIST1H3AP68431 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.32■■□□□ 1
HIST1H3AP68431 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.32■■□□□ 1
HIST1H3AP68431 AC060814.1-201ENST00000554326 538 ntBASIC21.32■■□□□ 1
HIST1H3AP68431 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.32■■□□□ 1
HIST1H3AP68431 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.32■■□□□ 1
HIST1H3AP68431 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HIST1H3AP68431 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.32■■□□□ 1
HIST1H3AP68431 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
HIST1H3AP68431 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
HIST1H3AP68431 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HIST1H3AP68431 AL157400.5-201ENST00000507624 621 ntBASIC21.31■■□□□ 1
HIST1H3AP68431 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
HIST1H3AP68431 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
HIST1H3AP68431 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.31■■□□□ 1
HIST1H3AP68431 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HIST1H3AP68431 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.3■■□□□ 1
HIST1H3AP68431 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.3■■□□□ 1
HIST1H3AP68431 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.3■■□□□ 1
HIST1H3AP68431 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
HIST1H3AP68431 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.3■■□□□ 1
HIST1H3AP68431 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.3■■□□□ 1
HIST1H3AP68431 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HIST1H3AP68431 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
HIST1H3AP68431 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HIST1H3AP68431 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.29■■□□□ 1
HIST1H3AP68431 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HIST1H3AP68431 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
HIST1H3AP68431 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.29■■□□□ 1
HIST1H3AP68431 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.28■■□□□ 1
HIST1H3AP68431 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HIST1H3AP68431 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.28■■□□□ 1
HIST1H3AP68431 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
HIST1H3AP68431 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HIST1H3AP68431 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.28■■□□□ 1
HIST1H3AP68431 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HIST1H3AP68431 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
HIST1H3AP68431 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.27■■□□□ 1
HIST1H3AP68431 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.27■■□□□ 1
HIST1H3AP68431 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.27■■□□□ 1
HIST1H3AP68431 MIR4449-201ENST00000578365 66 ntBASIC21.27■■□□□ 1
HIST1H3AP68431 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.27■■□□□ 1
HIST1H3AP68431 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HIST1H3AP68431 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
HIST1H3AP68431 AC010501.1-201ENST00000606270 1962 ntBASIC21.27■□□□□ 0.99
HIST1H3AP68431 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.26■□□□□ 0.99
HIST1H3AP68431 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST1H3AP68431 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST1H3AP68431 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST1H3AP68431 AC092296.2-201ENST00000589470 999 ntBASIC21.26■□□□□ 0.99
HIST1H3AP68431 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.26■□□□□ 0.99
HIST1H3AP68431 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST1H3AP68431 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIST1H3AP68431 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIST1H3AP68431 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIST1H3AP68431 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.25■□□□□ 0.99
HIST1H3AP68431 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.25■□□□□ 0.99
HIST1H3AP68431 AC025884.2-201ENST00000553429 711 ntBASIC21.25■□□□□ 0.99
HIST1H3AP68431 ERN1-208ENST00000606895 2068 ntBASIC21.25■□□□□ 0.99
HIST1H3AP68431 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.25■□□□□ 0.99
HIST1H3AP68431 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
HIST1H3AP68431 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST1H3AP68431 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST1H3AP68431 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.24■□□□□ 0.99
HIST1H3AP68431 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST1H3AP68431 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST1H3AP68431 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST1H3AP68431 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIST1H3AP68431 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.23■□□□□ 0.99
HIST1H3AP68431 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.23■□□□□ 0.99
HIST1H3AP68431 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIST1H3AP68431 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
HIST1H3AP68431 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST1H3AP68431 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST1H3AP68431 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HIST1H3AP68431 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HIST1H3AP68431 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.22■□□□□ 0.99
HIST1H3AP68431 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.22■□□□□ 0.99
HIST1H3AP68431 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HIST1H3AP68431 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HIST1H3AP68431 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.21■□□□□ 0.99
HIST1H3AP68431 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.2■□□□□ 0.98
HIST1H3AP68431 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HIST1H3AP68431 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HIST1H3AP68431 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HIST1H3AP68431 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.19■□□□□ 0.98
HIST1H3AP68431 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST1H3AP68431 ECEL1P2-201ENST00000461596 1295 ntBASIC21.19■□□□□ 0.98
HIST1H3AP68431 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HIST1H3AP68431 AC022413.1-201ENST00000624602 984 ntBASIC21.19■□□□□ 0.98
HIST1H3AP68431 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST1H3AP68431 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST1H3AP68431 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.19■□□□□ 0.98
HIST1H3AP68431 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST1H3AP68431 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 1127.4 ms