Protein–RNA interactions for Protein: P61006

RAB8A, Ras-related protein Rab-8A, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB8AP61006 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
RAB8AP61006 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RAB8AP61006 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RAB8AP61006 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
RAB8AP61006 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
RAB8AP61006 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RAB8AP61006 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RAB8AP61006 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RAB8AP61006 RARRES2P2-201ENST00000394842 485 ntBASIC23.24■■□□□ 1.31
RAB8AP61006 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.24■■□□□ 1.31
RAB8AP61006 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.24■■□□□ 1.31
RAB8AP61006 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RAB8AP61006 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RAB8AP61006 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RAB8AP61006 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RAB8AP61006 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RAB8AP61006 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RAB8AP61006 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
RAB8AP61006 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RAB8AP61006 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.23■■□□□ 1.31
RAB8AP61006 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.23■■□□□ 1.31
RAB8AP61006 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RAB8AP61006 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
RAB8AP61006 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.22■■□□□ 1.31
RAB8AP61006 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RAB8AP61006 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.22■■□□□ 1.31
RAB8AP61006 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.22■■□□□ 1.31
RAB8AP61006 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
RAB8AP61006 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RAB8AP61006 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.21■■□□□ 1.31
RAB8AP61006 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
RAB8AP61006 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.21■■□□□ 1.31
RAB8AP61006 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.21■■□□□ 1.31
RAB8AP61006 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RAB8AP61006 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RAB8AP61006 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RAB8AP61006 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.2■■□□□ 1.3
RAB8AP61006 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.2■■□□□ 1.3
RAB8AP61006 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RAB8AP61006 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
RAB8AP61006 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.2■■□□□ 1.3
RAB8AP61006 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.2■■□□□ 1.3
RAB8AP61006 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RAB8AP61006 MIR3960-201ENST00000583311 91 ntBASIC23.2■■□□□ 1.3
RAB8AP61006 AC007029.1-201ENST00000604183 313 ntBASIC23.2■■□□□ 1.3
RAB8AP61006 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
RAB8AP61006 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAB8AP61006 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RAB8AP61006 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAB8AP61006 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAB8AP61006 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.19■■□□□ 1.3
RAB8AP61006 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAB8AP61006 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RAB8AP61006 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAB8AP61006 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.18■■□□□ 1.3
RAB8AP61006 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAB8AP61006 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAB8AP61006 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAB8AP61006 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RAB8AP61006 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAB8AP61006 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.16■■□□□ 1.3
RAB8AP61006 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.16■■□□□ 1.3
RAB8AP61006 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.16■■□□□ 1.3
RAB8AP61006 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.16■■□□□ 1.3
RAB8AP61006 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RAB8AP61006 RP9P-202ENST00000450133 1212 ntBASIC23.16■■□□□ 1.3
RAB8AP61006 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RAB8AP61006 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RAB8AP61006 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAB8AP61006 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RAB8AP61006 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.15■■□□□ 1.3
RAB8AP61006 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAB8AP61006 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
RAB8AP61006 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAB8AP61006 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RAB8AP61006 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
RAB8AP61006 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RAB8AP61006 AC093536.1-201ENST00000569153 554 ntBASIC23.14■■□□□ 1.29
RAB8AP61006 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.14■■□□□ 1.29
RAB8AP61006 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RAB8AP61006 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RAB8AP61006 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RAB8AP61006 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
RAB8AP61006 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.11■■□□□ 1.29
RAB8AP61006 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RAB8AP61006 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.11■■□□□ 1.29
RAB8AP61006 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
RAB8AP61006 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.1■■□□□ 1.29
RAB8AP61006 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RAB8AP61006 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
RAB8AP61006 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RAB8AP61006 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.09■■□□□ 1.29
RAB8AP61006 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
RAB8AP61006 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RAB8AP61006 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
RAB8AP61006 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RAB8AP61006 AC026202.3-201ENST00000600805 1127 ntBASIC23.08■■□□□ 1.29
RAB8AP61006 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RAB8AP61006 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
RAB8AP61006 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms