Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.95■□□□□ 0.78
PRRX1P54821 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.95■□□□□ 0.78
PRRX1P54821 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.95■□□□□ 0.78
PRRX1P54821 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.95■□□□□ 0.78
PRRX1P54821 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.95■□□□□ 0.78
PRRX1P54821 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.95■□□□□ 0.78
PRRX1P54821 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.95■□□□□ 0.78
PRRX1P54821 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRRX1P54821 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRRX1P54821 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.94■□□□□ 0.78
PRRX1P54821 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRRX1P54821 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRRX1P54821 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PRRX1P54821 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PRRX1P54821 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRRX1P54821 AL157400.5-201ENST00000507624 621 ntBASIC19.93■□□□□ 0.78
PRRX1P54821 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.93■□□□□ 0.78
PRRX1P54821 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PRRX1P54821 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRRX1P54821 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRRX1P54821 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
PRRX1P54821 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.92■□□□□ 0.78
PRRX1P54821 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRRX1P54821 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PRRX1P54821 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.92■□□□□ 0.78
PRRX1P54821 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRRX1P54821 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRRX1P54821 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRRX1P54821 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRRX1P54821 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRRX1P54821 MIR3960-201ENST00000583311 91 ntBASIC19.91■□□□□ 0.78
PRRX1P54821 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRRX1P54821 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRRX1P54821 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PRRX1P54821 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.9■□□□□ 0.78
PRRX1P54821 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.9■□□□□ 0.78
PRRX1P54821 AC025884.2-201ENST00000553429 711 ntBASIC19.9■□□□□ 0.78
PRRX1P54821 RNF126P1-201ENST00000567452 1320 ntBASIC19.9■□□□□ 0.78
PRRX1P54821 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRRX1P54821 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.9■□□□□ 0.78
PRRX1P54821 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRRX1P54821 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRRX1P54821 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRRX1P54821 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRRX1P54821 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRRX1P54821 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.88■□□□□ 0.77
PRRX1P54821 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRRX1P54821 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
PRRX1P54821 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRRX1P54821 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRRX1P54821 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRRX1P54821 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRRX1P54821 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRRX1P54821 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRRX1P54821 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRRX1P54821 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRRX1P54821 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.87■□□□□ 0.77
PRRX1P54821 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRRX1P54821 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.87■□□□□ 0.77
PRRX1P54821 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRRX1P54821 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRRX1P54821 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.87■□□□□ 0.77
PRRX1P54821 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRRX1P54821 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRRX1P54821 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.86■□□□□ 0.77
PRRX1P54821 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.86■□□□□ 0.77
PRRX1P54821 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.86■□□□□ 0.77
PRRX1P54821 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRRX1P54821 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRRX1P54821 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRRX1P54821 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRRX1P54821 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRRX1P54821 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PRRX1P54821 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.85■□□□□ 0.77
PRRX1P54821 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRRX1P54821 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRRX1P54821 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.85■□□□□ 0.77
PRRX1P54821 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PRRX1P54821 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRRX1P54821 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRRX1P54821 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRRX1P54821 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.85■□□□□ 0.77
PRRX1P54821 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRRX1P54821 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRRX1P54821 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRRX1P54821 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRRX1P54821 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.84■□□□□ 0.77
PRRX1P54821 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRRX1P54821 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.84■□□□□ 0.77
PRRX1P54821 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.84■□□□□ 0.77
PRRX1P54821 HSD17B1P1-201ENST00000590052 955 ntBASIC19.84■□□□□ 0.77
PRRX1P54821 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRRX1P54821 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PRRX1P54821 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRRX1P54821 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.83■□□□□ 0.77
PRRX1P54821 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PRRX1P54821 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PRRX1P54821 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRRX1P54821 RP9P-202ENST00000450133 1212 ntBASIC19.83■□□□□ 0.77
PRRX1P54821 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms