Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CSNK1A1P48729 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSNK1A1P48729 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CSNK1A1P48729 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1A1P48729 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1A1P48729 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1A1P48729 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1A1P48729 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1A1P48729 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CSNK1A1P48729 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.64■■□□□ 1.05
CSNK1A1P48729 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.64■■□□□ 1.05
CSNK1A1P48729 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.64■■□□□ 1.05
CSNK1A1P48729 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CSNK1A1P48729 AC092296.2-201ENST00000589470 999 ntBASIC21.64■■□□□ 1.05
CSNK1A1P48729 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.64■■□□□ 1.05
CSNK1A1P48729 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.64■■□□□ 1.05
CSNK1A1P48729 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.62■■□□□ 1.05
CSNK1A1P48729 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CSNK1A1P48729 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.62■■□□□ 1.05
CSNK1A1P48729 GPX1-201ENST00000419349 1106 ntBASIC21.62■■□□□ 1.05
CSNK1A1P48729 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSNK1A1P48729 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1A1P48729 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.61■■□□□ 1.05
CSNK1A1P48729 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1A1P48729 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.61■■□□□ 1.05
CSNK1A1P48729 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1A1P48729 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CSNK1A1P48729 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1A1P48729 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1A1P48729 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1A1P48729 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1A1P48729 AC091060.1-201ENST00000623524 1766 ntBASIC21.6■■□□□ 1.05
CSNK1A1P48729 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1A1P48729 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1A1P48729 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1A1P48729 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CSNK1A1P48729 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1A1P48729 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1A1P48729 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.59■■□□□ 1.05
CSNK1A1P48729 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.59■■□□□ 1.05
CSNK1A1P48729 ECEL1P2-201ENST00000461596 1295 ntBASIC21.59■■□□□ 1.05
CSNK1A1P48729 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.59■■□□□ 1.05
CSNK1A1P48729 AC092803.2-201ENST00000564287 1899 ntBASIC21.59■■□□□ 1.05
CSNK1A1P48729 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1A1P48729 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1A1P48729 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
CSNK1A1P48729 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.58■■□□□ 1.05
CSNK1A1P48729 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.58■■□□□ 1.05
CSNK1A1P48729 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.58■■□□□ 1.04
CSNK1A1P48729 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.58■■□□□ 1.04
CSNK1A1P48729 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CSNK1A1P48729 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CSNK1A1P48729 SMPD5-203ENST00000639008 1464 ntBASIC21.58■■□□□ 1.04
CSNK1A1P48729 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.57■■□□□ 1.04
CSNK1A1P48729 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.57■■□□□ 1.04
CSNK1A1P48729 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.57■■□□□ 1.04
CSNK1A1P48729 AC025884.2-201ENST00000553429 711 ntBASIC21.57■■□□□ 1.04
CSNK1A1P48729 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CSNK1A1P48729 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CSNK1A1P48729 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.56■■□□□ 1.04
CSNK1A1P48729 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.56■■□□□ 1.04
CSNK1A1P48729 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CSNK1A1P48729 MIR3960-201ENST00000583311 91 ntBASIC21.55■■□□□ 1.04
CSNK1A1P48729 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CSNK1A1P48729 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSNK1A1P48729 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSNK1A1P48729 AC145676.1-201ENST00000514988 2004 ntBASIC21.54■■□□□ 1.04
CSNK1A1P48729 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CSNK1A1P48729 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.53■■□□□ 1.04
CSNK1A1P48729 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSNK1A1P48729 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CSNK1A1P48729 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CSNK1A1P48729 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSNK1A1P48729 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CSNK1A1P48729 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.52■■□□□ 1.04
CSNK1A1P48729 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.52■■□□□ 1.04
CSNK1A1P48729 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CSNK1A1P48729 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.52■■□□□ 1.04
CSNK1A1P48729 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.52■■□□□ 1.04
CSNK1A1P48729 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.52■■□□□ 1.04
CSNK1A1P48729 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CSNK1A1P48729 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CSNK1A1P48729 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.51■■□□□ 1.03
CSNK1A1P48729 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.51■■□□□ 1.03
CSNK1A1P48729 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.51■■□□□ 1.03
CSNK1A1P48729 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CSNK1A1P48729 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CSNK1A1P48729 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CSNK1A1P48729 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CSNK1A1P48729 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CSNK1A1P48729 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CSNK1A1P48729 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CSNK1A1P48729 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CSNK1A1P48729 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.5■■□□□ 1.03
CSNK1A1P48729 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CSNK1A1P48729 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CSNK1A1P48729 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CSNK1A1P48729 DUSP8P4-201ENST00000399538 1761 ntBASIC21.49■■□□□ 1.03
CSNK1A1P48729 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CSNK1A1P48729 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms