Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SSR2P43308 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SSR2P43308 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SSR2P43308 AC092296.2-201ENST00000589470 999 ntBASIC23.24■■□□□ 1.31
SSR2P43308 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SSR2P43308 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SSR2P43308 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.23■■□□□ 1.31
SSR2P43308 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
SSR2P43308 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.23■■□□□ 1.31
SSR2P43308 GPX1-201ENST00000419349 1106 ntBASIC23.23■■□□□ 1.31
SSR2P43308 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.23■■□□□ 1.31
SSR2P43308 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SSR2P43308 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SSR2P43308 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SSR2P43308 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SSR2P43308 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SSR2P43308 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SSR2P43308 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
SSR2P43308 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.21■■□□□ 1.31
SSR2P43308 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SSR2P43308 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
SSR2P43308 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.2■■□□□ 1.3
SSR2P43308 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SSR2P43308 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.2■■□□□ 1.3
SSR2P43308 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.2■■□□□ 1.3
SSR2P43308 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SSR2P43308 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SSR2P43308 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.19■■□□□ 1.3
SSR2P43308 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.19■■□□□ 1.3
SSR2P43308 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SSR2P43308 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SSR2P43308 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SSR2P43308 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SSR2P43308 ECEL1P2-201ENST00000461596 1295 ntBASIC23.18■■□□□ 1.3
SSR2P43308 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
SSR2P43308 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.18■■□□□ 1.3
SSR2P43308 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SSR2P43308 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SSR2P43308 AC091060.1-201ENST00000623524 1766 ntBASIC23.17■■□□□ 1.3
SSR2P43308 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SSR2P43308 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.17■■□□□ 1.3
SSR2P43308 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.17■■□□□ 1.3
SSR2P43308 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.17■■□□□ 1.3
SSR2P43308 AC092803.2-201ENST00000564287 1899 ntBASIC23.17■■□□□ 1.3
SSR2P43308 SMPD5-203ENST00000639008 1464 ntBASIC23.17■■□□□ 1.3
SSR2P43308 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
SSR2P43308 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SSR2P43308 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SSR2P43308 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.16■■□□□ 1.3
SSR2P43308 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.16■■□□□ 1.3
SSR2P43308 AC025884.2-201ENST00000553429 711 ntBASIC23.16■■□□□ 1.3
SSR2P43308 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SSR2P43308 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SSR2P43308 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
SSR2P43308 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SSR2P43308 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.15■■□□□ 1.3
SSR2P43308 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.14■■□□□ 1.29
SSR2P43308 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.14■■□□□ 1.29
SSR2P43308 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.14■■□□□ 1.29
SSR2P43308 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.14■■□□□ 1.29
SSR2P43308 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SSR2P43308 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.13■■□□□ 1.29
SSR2P43308 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SSR2P43308 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
SSR2P43308 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SSR2P43308 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SSR2P43308 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SSR2P43308 MIR3960-201ENST00000583311 91 ntBASIC23.12■■□□□ 1.29
SSR2P43308 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SSR2P43308 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
SSR2P43308 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SSR2P43308 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SSR2P43308 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SSR2P43308 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.11■■□□□ 1.29
SSR2P43308 AC145676.1-201ENST00000514988 2004 ntBASIC23.11■■□□□ 1.29
SSR2P43308 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.1■■□□□ 1.29
SSR2P43308 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SSR2P43308 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SSR2P43308 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
SSR2P43308 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.1■■□□□ 1.29
SSR2P43308 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.1■■□□□ 1.29
SSR2P43308 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.1■■□□□ 1.29
SSR2P43308 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SSR2P43308 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.09■■□□□ 1.29
SSR2P43308 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SSR2P43308 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.09■■□□□ 1.29
SSR2P43308 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.09■■□□□ 1.29
SSR2P43308 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.09■■□□□ 1.29
SSR2P43308 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SSR2P43308 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SSR2P43308 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.08■■□□□ 1.29
SSR2P43308 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SSR2P43308 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
SSR2P43308 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SSR2P43308 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SSR2P43308 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.07■■□□□ 1.28
SSR2P43308 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
SSR2P43308 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SSR2P43308 RNF126P1-201ENST00000567452 1320 ntBASIC23.07■■□□□ 1.28
SSR2P43308 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms