Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CEACAM3P40198 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CEACAM3P40198 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.79■□□□□ 0.76
CEACAM3P40198 AC007029.1-201ENST00000604183 313 ntBASIC19.79■□□□□ 0.76
CEACAM3P40198 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CEACAM3P40198 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.79■□□□□ 0.76
CEACAM3P40198 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CEACAM3P40198 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CEACAM3P40198 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CEACAM3P40198 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CEACAM3P40198 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CEACAM3P40198 RP9P-202ENST00000450133 1212 ntBASIC19.78■□□□□ 0.76
CEACAM3P40198 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.78■□□□□ 0.76
CEACAM3P40198 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.78■□□□□ 0.76
CEACAM3P40198 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CEACAM3P40198 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CEACAM3P40198 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.78■□□□□ 0.76
CEACAM3P40198 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CEACAM3P40198 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CEACAM3P40198 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CEACAM3P40198 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.77■□□□□ 0.76
CEACAM3P40198 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CEACAM3P40198 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CEACAM3P40198 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CEACAM3P40198 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.77■□□□□ 0.76
CEACAM3P40198 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CEACAM3P40198 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CEACAM3P40198 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CEACAM3P40198 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.75
CEACAM3P40198 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CEACAM3P40198 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CEACAM3P40198 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.76■□□□□ 0.75
CEACAM3P40198 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.76■□□□□ 0.75
CEACAM3P40198 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.76■□□□□ 0.75
CEACAM3P40198 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.76■□□□□ 0.75
CEACAM3P40198 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.75■□□□□ 0.75
CEACAM3P40198 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.75■□□□□ 0.75
CEACAM3P40198 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CEACAM3P40198 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CEACAM3P40198 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CEACAM3P40198 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CEACAM3P40198 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CEACAM3P40198 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.74■□□□□ 0.75
CEACAM3P40198 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CEACAM3P40198 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CEACAM3P40198 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
CEACAM3P40198 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CEACAM3P40198 AC093536.1-201ENST00000569153 554 ntBASIC19.73■□□□□ 0.75
CEACAM3P40198 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.73■□□□□ 0.75
CEACAM3P40198 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.73■□□□□ 0.75
CEACAM3P40198 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.73■□□□□ 0.75
CEACAM3P40198 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.73■□□□□ 0.75
CEACAM3P40198 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CEACAM3P40198 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CEACAM3P40198 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CEACAM3P40198 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CEACAM3P40198 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CEACAM3P40198 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CEACAM3P40198 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CEACAM3P40198 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CEACAM3P40198 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CEACAM3P40198 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CEACAM3P40198 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CEACAM3P40198 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
CEACAM3P40198 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.71■□□□□ 0.75
CEACAM3P40198 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.71■□□□□ 0.75
CEACAM3P40198 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CEACAM3P40198 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CEACAM3P40198 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CEACAM3P40198 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CEACAM3P40198 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CEACAM3P40198 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.7■□□□□ 0.74
CEACAM3P40198 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CEACAM3P40198 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.7■□□□□ 0.74
CEACAM3P40198 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CEACAM3P40198 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CEACAM3P40198 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CEACAM3P40198 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CEACAM3P40198 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CEACAM3P40198 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CEACAM3P40198 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CEACAM3P40198 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CEACAM3P40198 ABHD17AP5-201ENST00000580133 923 ntBASIC19.69■□□□□ 0.74
CEACAM3P40198 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CEACAM3P40198 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CEACAM3P40198 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CEACAM3P40198 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CEACAM3P40198 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CEACAM3P40198 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CEACAM3P40198 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.68■□□□□ 0.74
CEACAM3P40198 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CEACAM3P40198 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CEACAM3P40198 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.68■□□□□ 0.74
CEACAM3P40198 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.68■□□□□ 0.74
CEACAM3P40198 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.68■□□□□ 0.74
CEACAM3P40198 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CEACAM3P40198 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CEACAM3P40198 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CEACAM3P40198 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CEACAM3P40198 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms