Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GDNFP39905 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
GDNFP39905 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.04■□□□□ 0.96
GDNFP39905 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.03■□□□□ 0.96
GDNFP39905 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.03■□□□□ 0.96
GDNFP39905 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
GDNFP39905 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GDNFP39905 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.03■□□□□ 0.96
GDNFP39905 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.03■□□□□ 0.96
GDNFP39905 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.03■□□□□ 0.96
GDNFP39905 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GDNFP39905 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GDNFP39905 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDNFP39905 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDNFP39905 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDNFP39905 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDNFP39905 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.02■□□□□ 0.96
GDNFP39905 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
GDNFP39905 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
GDNFP39905 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.02■□□□□ 0.95
GDNFP39905 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDNFP39905 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDNFP39905 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDNFP39905 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GDNFP39905 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.01■□□□□ 0.95
GDNFP39905 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDNFP39905 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
GDNFP39905 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.01■□□□□ 0.95
GDNFP39905 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDNFP39905 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDNFP39905 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GDNFP39905 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
GDNFP39905 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21■□□□□ 0.95
GDNFP39905 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GDNFP39905 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21■□□□□ 0.95
GDNFP39905 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
GDNFP39905 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21■□□□□ 0.95
GDNFP39905 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21■□□□□ 0.95
GDNFP39905 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GDNFP39905 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21■□□□□ 0.95
GDNFP39905 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDNFP39905 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.99■□□□□ 0.95
GDNFP39905 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.99■□□□□ 0.95
GDNFP39905 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.99■□□□□ 0.95
GDNFP39905 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDNFP39905 AL139125.2-201ENST00000623134 1869 ntBASIC20.98■□□□□ 0.95
GDNFP39905 AC142472.1-201ENST00000612013 1741 ntBASIC20.98■□□□□ 0.95
GDNFP39905 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDNFP39905 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDNFP39905 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDNFP39905 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
GDNFP39905 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDNFP39905 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
GDNFP39905 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDNFP39905 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDNFP39905 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GDNFP39905 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.97■□□□□ 0.95
GDNFP39905 AC133561.1-201ENST00000568600 2415 ntBASIC20.97■□□□□ 0.95
GDNFP39905 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GDNFP39905 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GDNFP39905 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
GDNFP39905 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.96■□□□□ 0.95
GDNFP39905 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GDNFP39905 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
GDNFP39905 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GDNFP39905 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.95■□□□□ 0.94
GDNFP39905 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.95■□□□□ 0.94
GDNFP39905 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GDNFP39905 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GDNFP39905 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
GDNFP39905 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GDNFP39905 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
GDNFP39905 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GDNFP39905 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
GDNFP39905 AC138932.3-201ENST00000567634 1902 ntBASIC20.94■□□□□ 0.94
GDNFP39905 AC010501.1-201ENST00000606270 1962 ntBASIC20.94■□□□□ 0.94
GDNFP39905 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.93■□□□□ 0.94
GDNFP39905 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
GDNFP39905 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GDNFP39905 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
GDNFP39905 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
GDNFP39905 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
GDNFP39905 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GDNFP39905 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GDNFP39905 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GDNFP39905 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GDNFP39905 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.92■□□□□ 0.94
GDNFP39905 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
GDNFP39905 AC022211.4-201ENST00000625094 2161 ntBASIC20.92■□□□□ 0.94
GDNFP39905 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
GDNFP39905 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
GDNFP39905 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GDNFP39905 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GDNFP39905 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GDNFP39905 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
GDNFP39905 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
GDNFP39905 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.91■□□□□ 0.94
GDNFP39905 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.91■□□□□ 0.94
GDNFP39905 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GDNFP39905 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms