Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SMIM17P0DL12 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMIM17P0DL12 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SMIM17P0DL12 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SMIM17P0DL12 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM17P0DL12 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.95■□□□□ 0.46
SMIM17P0DL12 AP004609.3-201ENST00000610705 1884 ntBASIC17.95■□□□□ 0.46
SMIM17P0DL12 LINC00543-201ENST00000567234 1845 ntBASIC17.95■□□□□ 0.46
SMIM17P0DL12 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM17P0DL12 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.95■□□□□ 0.46
SMIM17P0DL12 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMIM17P0DL12 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.94■□□□□ 0.46
SMIM17P0DL12 HNRNPLP2-201ENST00000568980 1570 ntBASIC17.94■□□□□ 0.46
SMIM17P0DL12 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
SMIM17P0DL12 AC092803.2-201ENST00000564287 1899 ntBASIC17.94■□□□□ 0.46
SMIM17P0DL12 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMIM17P0DL12 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMIM17P0DL12 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM17P0DL12 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM17P0DL12 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM17P0DL12 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM17P0DL12 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM17P0DL12 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMIM17P0DL12 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMIM17P0DL12 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMIM17P0DL12 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.92■□□□□ 0.46
SMIM17P0DL12 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMIM17P0DL12 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.92■□□□□ 0.46
SMIM17P0DL12 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.92■□□□□ 0.46
SMIM17P0DL12 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMIM17P0DL12 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SMIM17P0DL12 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMIM17P0DL12 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMIM17P0DL12 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.91■□□□□ 0.46
SMIM17P0DL12 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMIM17P0DL12 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
SMIM17P0DL12 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMIM17P0DL12 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SMIM17P0DL12 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMIM17P0DL12 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMIM17P0DL12 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMIM17P0DL12 DUSP8P4-201ENST00000399538 1761 ntBASIC17.9■□□□□ 0.46
SMIM17P0DL12 SUZ12P1-203ENST00000578195 985 ntBASIC17.9■□□□□ 0.46
SMIM17P0DL12 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.9■□□□□ 0.46
SMIM17P0DL12 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMIM17P0DL12 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SMIM17P0DL12 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMIM17P0DL12 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMIM17P0DL12 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.89■□□□□ 0.45
SMIM17P0DL12 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMIM17P0DL12 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC17.89■□□□□ 0.45
SMIM17P0DL12 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMIM17P0DL12 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMIM17P0DL12 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SMIM17P0DL12 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMIM17P0DL12 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMIM17P0DL12 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMIM17P0DL12 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SMIM17P0DL12 MIR6090-201ENST00000622481 60 ntBASIC17.88■□□□□ 0.45
SMIM17P0DL12 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMIM17P0DL12 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.88■□□□□ 0.45
SMIM17P0DL12 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMIM17P0DL12 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.87■□□□□ 0.45
SMIM17P0DL12 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMIM17P0DL12 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.87■□□□□ 0.45
SMIM17P0DL12 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMIM17P0DL12 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMIM17P0DL12 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMIM17P0DL12 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMIM17P0DL12 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.86■□□□□ 0.45
SMIM17P0DL12 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMIM17P0DL12 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMIM17P0DL12 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
SMIM17P0DL12 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM17P0DL12 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM17P0DL12 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SMIM17P0DL12 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SMIM17P0DL12 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM17P0DL12 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.85■□□□□ 0.45
SMIM17P0DL12 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC17.85■□□□□ 0.45
SMIM17P0DL12 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SMIM17P0DL12 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.85■□□□□ 0.45
SMIM17P0DL12 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM17P0DL12 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM17P0DL12 PKD1P6-201ENST00000343738 4769 ntBASIC17.84■□□□□ 0.45
SMIM17P0DL12 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM17P0DL12 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SMIM17P0DL12 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.84■□□□□ 0.45
SMIM17P0DL12 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.84■□□□□ 0.45
SMIM17P0DL12 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM17P0DL12 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM17P0DL12 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMIM17P0DL12 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMIM17P0DL12 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SMIM17P0DL12 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMIM17P0DL12 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMIM17P0DL12 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMIM17P0DL12 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.83■□□□□ 0.44
SMIM17P0DL12 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SMIM17P0DL12 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms