Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CAPN1P07384 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CAPN1P07384 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.85■■□□□ 1.41
CAPN1P07384 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CAPN1P07384 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CAPN1P07384 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CAPN1P07384 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CAPN1P07384 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.84■■□□□ 1.41
CAPN1P07384 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CAPN1P07384 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CAPN1P07384 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CAPN1P07384 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
CAPN1P07384 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CAPN1P07384 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CAPN1P07384 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CAPN1P07384 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.82■■□□□ 1.4
CAPN1P07384 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CAPN1P07384 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CAPN1P07384 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CAPN1P07384 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.81■■□□□ 1.4
CAPN1P07384 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CAPN1P07384 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CAPN1P07384 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CAPN1P07384 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
CAPN1P07384 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.8■■□□□ 1.4
CAPN1P07384 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
CAPN1P07384 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CAPN1P07384 DUSP8P4-201ENST00000399538 1761 ntBASIC23.8■■□□□ 1.4
CAPN1P07384 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.79■■□□□ 1.4
CAPN1P07384 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CAPN1P07384 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CAPN1P07384 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CAPN1P07384 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CAPN1P07384 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CAPN1P07384 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CAPN1P07384 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CAPN1P07384 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CAPN1P07384 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.78■■□□□ 1.4
CAPN1P07384 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
CAPN1P07384 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.78■■□□□ 1.4
CAPN1P07384 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.78■■□□□ 1.4
CAPN1P07384 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CAPN1P07384 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.78■■□□□ 1.4
CAPN1P07384 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.78■■□□□ 1.4
CAPN1P07384 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CAPN1P07384 AC092296.2-201ENST00000589470 999 ntBASIC23.77■■□□□ 1.4
CAPN1P07384 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.77■■□□□ 1.4
CAPN1P07384 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CAPN1P07384 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CAPN1P07384 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CAPN1P07384 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CAPN1P07384 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CAPN1P07384 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.76■■□□□ 1.39
CAPN1P07384 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.76■■□□□ 1.39
CAPN1P07384 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CAPN1P07384 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CAPN1P07384 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CAPN1P07384 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CAPN1P07384 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CAPN1P07384 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CAPN1P07384 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
CAPN1P07384 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CAPN1P07384 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CAPN1P07384 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.75■■□□□ 1.39
CAPN1P07384 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CAPN1P07384 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.75■■□□□ 1.39
CAPN1P07384 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CAPN1P07384 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CAPN1P07384 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CAPN1P07384 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CAPN1P07384 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CAPN1P07384 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CAPN1P07384 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CAPN1P07384 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CAPN1P07384 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CAPN1P07384 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CAPN1P07384 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CAPN1P07384 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CAPN1P07384 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CAPN1P07384 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.73■■□□□ 1.39
CAPN1P07384 NTF6A-201ENST00000591175 560 ntBASIC23.73■■□□□ 1.39
CAPN1P07384 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CAPN1P07384 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
CAPN1P07384 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CAPN1P07384 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CAPN1P07384 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.72■■□□□ 1.39
CAPN1P07384 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CAPN1P07384 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CAPN1P07384 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.71■■□□□ 1.39
CAPN1P07384 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CAPN1P07384 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.71■■□□□ 1.39
CAPN1P07384 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CAPN1P07384 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.71■■□□□ 1.39
CAPN1P07384 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.71■■□□□ 1.39
CAPN1P07384 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CAPN1P07384 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CAPN1P07384 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.7■■□□□ 1.38
CAPN1P07384 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CAPN1P07384 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CAPN1P07384 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms