Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SNRNP200O75643 AP004609.3-201ENST00000610705 1884 ntBASIC23.52■■□□□ 1.36
SNRNP200O75643 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SNRNP200O75643 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
SNRNP200O75643 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SNRNP200O75643 AC009831.1-201ENST00000580420 1582 ntBASIC23.51■■□□□ 1.35
SNRNP200O75643 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
SNRNP200O75643 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SNRNP200O75643 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.51■■□□□ 1.35
SNRNP200O75643 AL592293.1-201ENST00000502889 1188 ntBASIC23.51■■□□□ 1.35
SNRNP200O75643 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SNRNP200O75643 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SNRNP200O75643 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
SNRNP200O75643 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SNRNP200O75643 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SNRNP200O75643 AC026202.3-201ENST00000600805 1127 ntBASIC23.5■■□□□ 1.35
SNRNP200O75643 U85056.1-201ENST00000616429 682 ntBASIC23.5■■□□□ 1.35
SNRNP200O75643 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
SNRNP200O75643 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.49■■□□□ 1.35
SNRNP200O75643 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SNRNP200O75643 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.49■■□□□ 1.35
SNRNP200O75643 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SNRNP200O75643 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
SNRNP200O75643 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.48■■□□□ 1.35
SNRNP200O75643 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SNRNP200O75643 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
SNRNP200O75643 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.47■■□□□ 1.35
SNRNP200O75643 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SNRNP200O75643 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SNRNP200O75643 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SNRNP200O75643 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SNRNP200O75643 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SNRNP200O75643 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
SNRNP200O75643 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
SNRNP200O75643 AC012354.3-201ENST00000623734 483 ntBASIC23.46■■□□□ 1.35
SNRNP200O75643 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SNRNP200O75643 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SNRNP200O75643 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SNRNP200O75643 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.46■■□□□ 1.35
SNRNP200O75643 MIR3960-201ENST00000583311 91 ntBASIC23.45■■□□□ 1.35
SNRNP200O75643 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.45■■□□□ 1.35
SNRNP200O75643 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
SNRNP200O75643 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SNRNP200O75643 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.45■■□□□ 1.34
SNRNP200O75643 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.45■■□□□ 1.34
SNRNP200O75643 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.45■■□□□ 1.34
SNRNP200O75643 SPCS2P3-201ENST00000500401 656 ntBASIC23.44■■□□□ 1.34
SNRNP200O75643 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
SNRNP200O75643 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SNRNP200O75643 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.44■■□□□ 1.34
SNRNP200O75643 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
SNRNP200O75643 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SNRNP200O75643 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
SNRNP200O75643 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
SNRNP200O75643 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
SNRNP200O75643 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.43■■□□□ 1.34
SNRNP200O75643 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
SNRNP200O75643 RP9P-202ENST00000450133 1212 ntBASIC23.42■■□□□ 1.34
SNRNP200O75643 AC129492.7-201ENST00000622992 756 ntBASIC23.42■■□□□ 1.34
SNRNP200O75643 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
SNRNP200O75643 DUX4L9-201ENST00000449051 1259 ntBASIC23.42■■□□□ 1.34
SNRNP200O75643 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.42■■□□□ 1.34
SNRNP200O75643 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SNRNP200O75643 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SNRNP200O75643 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
SNRNP200O75643 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SNRNP200O75643 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SNRNP200O75643 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
SNRNP200O75643 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.41■■□□□ 1.34
SNRNP200O75643 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
SNRNP200O75643 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.4■■□□□ 1.34
SNRNP200O75643 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SNRNP200O75643 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
SNRNP200O75643 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
SNRNP200O75643 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SNRNP200O75643 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
SNRNP200O75643 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
SNRNP200O75643 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SNRNP200O75643 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SNRNP200O75643 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SNRNP200O75643 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.38■■□□□ 1.33
SNRNP200O75643 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SNRNP200O75643 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SNRNP200O75643 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SNRNP200O75643 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SNRNP200O75643 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SNRNP200O75643 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SNRNP200O75643 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.37■■□□□ 1.33
SNRNP200O75643 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SNRNP200O75643 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SNRNP200O75643 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.37■■□□□ 1.33
SNRNP200O75643 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
SNRNP200O75643 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SNRNP200O75643 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SNRNP200O75643 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
SNRNP200O75643 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.36■■□□□ 1.33
SNRNP200O75643 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SNRNP200O75643 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.35■■□□□ 1.33
SNRNP200O75643 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.35■■□□□ 1.33
SNRNP200O75643 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms