Protein–RNA interactions for Protein: I3L3M4

Claudin, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
I3L3M4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
I3L3M4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
I3L3M4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
I3L3M4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
I3L3M4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
I3L3M4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
I3L3M4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
I3L3M4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.2■□□□□ 0.34
I3L3M4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
I3L3M4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
I3L3M4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
I3L3M4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
I3L3M4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.19■□□□□ 0.34
I3L3M4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.19■□□□□ 0.34
I3L3M4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
I3L3M4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
I3L3M4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
I3L3M4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
I3L3M4 AP006261.1-201ENST00000584783 668 ntBASIC17.18■□□□□ 0.34
I3L3M4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
I3L3M4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
I3L3M4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.17■□□□□ 0.34
I3L3M4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
I3L3M4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
I3L3M4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.17■□□□□ 0.34
I3L3M4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
I3L3M4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
I3L3M4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
I3L3M4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.16■□□□□ 0.34
I3L3M4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.16■□□□□ 0.34
I3L3M4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
I3L3M4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.16■□□□□ 0.34
I3L3M4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.16■□□□□ 0.34
I3L3M4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
I3L3M4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
I3L3M4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.15■□□□□ 0.34
I3L3M4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
I3L3M4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.15■□□□□ 0.34
I3L3M4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
I3L3M4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
I3L3M4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
I3L3M4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
I3L3M4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
I3L3M4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.15■□□□□ 0.34
I3L3M4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
I3L3M4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
I3L3M4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.14■□□□□ 0.33
I3L3M4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
I3L3M4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
I3L3M4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.14■□□□□ 0.33
I3L3M4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
I3L3M4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
I3L3M4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.14■□□□□ 0.33
I3L3M4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
I3L3M4 AC022211.4-201ENST00000625094 2161 ntBASIC17.13■□□□□ 0.33
I3L3M4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
I3L3M4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
I3L3M4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
I3L3M4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
I3L3M4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
I3L3M4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
I3L3M4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
I3L3M4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
I3L3M4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
I3L3M4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.12■□□□□ 0.33
I3L3M4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.12■□□□□ 0.33
I3L3M4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
I3L3M4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
I3L3M4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
I3L3M4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
I3L3M4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
I3L3M4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
I3L3M4 AC087741.3-201ENST00000624270 1347 ntBASIC17.11■□□□□ 0.33
I3L3M4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
I3L3M4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
I3L3M4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
I3L3M4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
I3L3M4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
I3L3M4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
I3L3M4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
I3L3M4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.1■□□□□ 0.33
I3L3M4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.1■□□□□ 0.33
I3L3M4 AC044849.2-201ENST00000606596 710 ntBASIC17.1■□□□□ 0.33
I3L3M4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
I3L3M4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.1■□□□□ 0.33
I3L3M4 AC138932.3-201ENST00000567634 1902 ntBASIC17.09■□□□□ 0.33
I3L3M4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
I3L3M4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
I3L3M4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
I3L3M4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.09■□□□□ 0.33
I3L3M4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
I3L3M4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
I3L3M4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
I3L3M4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
I3L3M4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.08■□□□□ 0.32
I3L3M4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.08■□□□□ 0.32
I3L3M4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
I3L3M4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
I3L3M4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
I3L3M4 AL139125.2-201ENST00000623134 1869 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms