Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COLCA2A8K830 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
COLCA2A8K830 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COLCA2A8K830 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.96■□□□□ 0.63
COLCA2A8K830 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COLCA2A8K830 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
COLCA2A8K830 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COLCA2A8K830 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
COLCA2A8K830 AC010864.1-201ENST00000609407 1511 ntBASIC18.95■□□□□ 0.62
COLCA2A8K830 LINC00565-201ENST00000562710 2331 ntBASIC18.95■□□□□ 0.62
COLCA2A8K830 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COLCA2A8K830 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.95■□□□□ 0.62
COLCA2A8K830 AL117328.2-201ENST00000624617 1940 ntBASIC18.95■□□□□ 0.62
COLCA2A8K830 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COLCA2A8K830 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COLCA2A8K830 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COLCA2A8K830 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COLCA2A8K830 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COLCA2A8K830 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COLCA2A8K830 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.93■□□□□ 0.62
COLCA2A8K830 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLCA2A8K830 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLCA2A8K830 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.93■□□□□ 0.62
COLCA2A8K830 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COLCA2A8K830 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLCA2A8K830 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLCA2A8K830 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.93■□□□□ 0.62
COLCA2A8K830 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COLCA2A8K830 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COLCA2A8K830 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
COLCA2A8K830 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COLCA2A8K830 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COLCA2A8K830 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.92■□□□□ 0.62
COLCA2A8K830 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COLCA2A8K830 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
COLCA2A8K830 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COLCA2A8K830 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.91■□□□□ 0.62
COLCA2A8K830 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COLCA2A8K830 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COLCA2A8K830 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COLCA2A8K830 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COLCA2A8K830 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COLCA2A8K830 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.91■□□□□ 0.62
COLCA2A8K830 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
COLCA2A8K830 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COLCA2A8K830 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COLCA2A8K830 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COLCA2A8K830 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COLCA2A8K830 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COLCA2A8K830 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COLCA2A8K830 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
COLCA2A8K830 C9orf163-202ENST00000624034 2573 ntBASIC18.89■□□□□ 0.62
COLCA2A8K830 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.89■□□□□ 0.61
COLCA2A8K830 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
COLCA2A8K830 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
COLCA2A8K830 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COLCA2A8K830 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COLCA2A8K830 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COLCA2A8K830 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COLCA2A8K830 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COLCA2A8K830 WHAMMP3-201ENST00000611636 1609 ntBASIC18.89■□□□□ 0.61
COLCA2A8K830 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.88■□□□□ 0.61
COLCA2A8K830 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA2A8K830 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA2A8K830 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA2A8K830 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA2A8K830 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC18.88■□□□□ 0.61
COLCA2A8K830 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA2A8K830 C1orf229-201ENST00000623686 2258 ntBASIC18.88■□□□□ 0.61
COLCA2A8K830 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA2A8K830 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.88■□□□□ 0.61
COLCA2A8K830 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA2A8K830 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
COLCA2A8K830 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COLCA2A8K830 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COLCA2A8K830 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
COLCA2A8K830 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COLCA2A8K830 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COLCA2A8K830 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.86■□□□□ 0.61
COLCA2A8K830 AC100797.4-201ENST00000631653 1827 ntBASIC18.86■□□□□ 0.61
COLCA2A8K830 AP002414.2-202ENST00000590929 1450 ntBASIC18.86■□□□□ 0.61
COLCA2A8K830 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
COLCA2A8K830 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.86■□□□□ 0.61
COLCA2A8K830 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.86■□□□□ 0.61
COLCA2A8K830 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COLCA2A8K830 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.85■□□□□ 0.61
COLCA2A8K830 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.85■□□□□ 0.61
COLCA2A8K830 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COLCA2A8K830 LINC01124-201ENST00000409786 2117 ntBASIC18.85■□□□□ 0.61
COLCA2A8K830 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COLCA2A8K830 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.85■□□□□ 0.61
COLCA2A8K830 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.85■□□□□ 0.61
COLCA2A8K830 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COLCA2A8K830 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COLCA2A8K830 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COLCA2A8K830 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COLCA2A8K830 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLCA2A8K830 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLCA2A8K830 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLCA2A8K830 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms