Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC29.17■■■□□ 2.26
TMEM88BA6NKF7 RPS2P7-201ENST00000447334 885 ntBASIC29.17■■■□□ 2.26
TMEM88BA6NKF7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC29.17■■■□□ 2.26
TMEM88BA6NKF7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
TMEM88BA6NKF7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
TMEM88BA6NKF7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC29.16■■■□□ 2.26
TMEM88BA6NKF7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC29.16■■■□□ 2.26
TMEM88BA6NKF7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
TMEM88BA6NKF7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC29.15■■■□□ 2.26
TMEM88BA6NKF7 AC096631.2-201ENST00000436136 790 ntBASIC29.15■■■□□ 2.26
TMEM88BA6NKF7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC29.15■■■□□ 2.26
TMEM88BA6NKF7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
TMEM88BA6NKF7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
TMEM88BA6NKF7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.26
TMEM88BA6NKF7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC29.14■■■□□ 2.26
TMEM88BA6NKF7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC29.14■■■□□ 2.26
TMEM88BA6NKF7 AC133561.4-201ENST00000566112 224 ntBASIC29.14■■■□□ 2.26
TMEM88BA6NKF7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
TMEM88BA6NKF7 AC104564.3-201ENST00000582367 638 ntBASIC29.13■■■□□ 2.25
TMEM88BA6NKF7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
TMEM88BA6NKF7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
TMEM88BA6NKF7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
TMEM88BA6NKF7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC29.12■■■□□ 2.25
TMEM88BA6NKF7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC29.12■■■□□ 2.25
TMEM88BA6NKF7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
TMEM88BA6NKF7 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
TMEM88BA6NKF7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
TMEM88BA6NKF7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
TMEM88BA6NKF7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
TMEM88BA6NKF7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
TMEM88BA6NKF7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC29.11■■■□□ 2.25
TMEM88BA6NKF7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
TMEM88BA6NKF7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
TMEM88BA6NKF7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
TMEM88BA6NKF7 AC022616.5-201ENST00000518796 181 ntBASIC29.1■■■□□ 2.25
TMEM88BA6NKF7 AC137630.3-201ENST00000607245 391 ntBASIC29.1■■■□□ 2.25
TMEM88BA6NKF7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
TMEM88BA6NKF7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
TMEM88BA6NKF7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
TMEM88BA6NKF7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
TMEM88BA6NKF7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
TMEM88BA6NKF7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
TMEM88BA6NKF7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC29.09■■■□□ 2.25
TMEM88BA6NKF7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC29.09■■■□□ 2.25
TMEM88BA6NKF7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
TMEM88BA6NKF7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
TMEM88BA6NKF7 ZNRF2P3-201ENST00000424200 374 ntBASIC29.08■■■□□ 2.25
TMEM88BA6NKF7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC29.08■■■□□ 2.25
TMEM88BA6NKF7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
TMEM88BA6NKF7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC29.07■■■□□ 2.24
TMEM88BA6NKF7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC29.07■■■□□ 2.24
TMEM88BA6NKF7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC29.07■■■□□ 2.24
TMEM88BA6NKF7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
TMEM88BA6NKF7 AC021242.3-201ENST00000607598 1377 ntBASIC29.07■■■□□ 2.24
TMEM88BA6NKF7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.06■■■□□ 2.24
TMEM88BA6NKF7 AC100797.4-201ENST00000631653 1827 ntBASIC29.06■■■□□ 2.24
TMEM88BA6NKF7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
TMEM88BA6NKF7 KRT18P24-201ENST00000344739 1156 ntBASIC29.06■■■□□ 2.24
TMEM88BA6NKF7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
TMEM88BA6NKF7 AC026271.2-201ENST00000428091 497 ntBASIC29.06■■■□□ 2.24
TMEM88BA6NKF7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
TMEM88BA6NKF7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC29.05■■■□□ 2.24
TMEM88BA6NKF7 AL359504.2-201ENST00000605506 1601 ntBASIC29.05■■■□□ 2.24
TMEM88BA6NKF7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
TMEM88BA6NKF7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
TMEM88BA6NKF7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC29.05■■■□□ 2.24
TMEM88BA6NKF7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC29.05■■■□□ 2.24
TMEM88BA6NKF7 AP004833.2-201ENST00000532228 1454 ntBASIC29.04■■■□□ 2.24
TMEM88BA6NKF7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC29.04■■■□□ 2.24
TMEM88BA6NKF7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
TMEM88BA6NKF7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
TMEM88BA6NKF7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
TMEM88BA6NKF7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
TMEM88BA6NKF7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC29.03■■■□□ 2.24
TMEM88BA6NKF7 AL117332.1-201ENST00000622628 974 ntBASIC29.03■■■□□ 2.24
TMEM88BA6NKF7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
TMEM88BA6NKF7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC29.02■■■□□ 2.24
TMEM88BA6NKF7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
TMEM88BA6NKF7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC29.02■■■□□ 2.24
TMEM88BA6NKF7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC29.02■■■□□ 2.24
TMEM88BA6NKF7 AC092028.1-203ENST00000608262 953 ntBASIC29.02■■■□□ 2.24
TMEM88BA6NKF7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC29.02■■■□□ 2.24
TMEM88BA6NKF7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
TMEM88BA6NKF7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
TMEM88BA6NKF7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
TMEM88BA6NKF7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
TMEM88BA6NKF7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC29.01■■■□□ 2.23
TMEM88BA6NKF7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.23
TMEM88BA6NKF7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC29.01■■■□□ 2.23
TMEM88BA6NKF7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
TMEM88BA6NKF7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC29■■■□□ 2.23
TMEM88BA6NKF7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC29■■■□□ 2.23
TMEM88BA6NKF7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC29■■■□□ 2.23
TMEM88BA6NKF7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.99■■■□□ 2.23
TMEM88BA6NKF7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC28.99■■■□□ 2.23
TMEM88BA6NKF7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
TMEM88BA6NKF7 MIR3621-201ENST00000580529 85 ntBASIC28.99■■■□□ 2.23
TMEM88BA6NKF7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
TMEM88BA6NKF7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC28.98■■■□□ 2.23
TMEM88BA6NKF7 MIR5787-201ENST00000611784 55 ntBASIC28.98■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms