Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.47■■□□□ 1.19
SH3D21A4FU49 AP004609.3-201ENST00000610705 1884 ntBASIC22.46■■□□□ 1.19
SH3D21A4FU49 AC008813.1-201ENST00000536597 885 ntBASIC22.46■■□□□ 1.19
SH3D21A4FU49 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.46■■□□□ 1.19
SH3D21A4FU49 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SH3D21A4FU49 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SH3D21A4FU49 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SH3D21A4FU49 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.19
SH3D21A4FU49 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
SH3D21A4FU49 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SH3D21A4FU49 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SH3D21A4FU49 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
SH3D21A4FU49 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SH3D21A4FU49 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.45■■□□□ 1.18
SH3D21A4FU49 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
SH3D21A4FU49 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
SH3D21A4FU49 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SH3D21A4FU49 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SH3D21A4FU49 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
SH3D21A4FU49 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SH3D21A4FU49 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.45■■□□□ 1.18
SH3D21A4FU49 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
SH3D21A4FU49 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SH3D21A4FU49 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.45■■□□□ 1.18
SH3D21A4FU49 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.44■■□□□ 1.18
SH3D21A4FU49 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.44■■□□□ 1.18
SH3D21A4FU49 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SH3D21A4FU49 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.43■■□□□ 1.18
SH3D21A4FU49 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SH3D21A4FU49 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SH3D21A4FU49 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.43■■□□□ 1.18
SH3D21A4FU49 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SH3D21A4FU49 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SH3D21A4FU49 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
SH3D21A4FU49 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SH3D21A4FU49 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.42■■□□□ 1.18
SH3D21A4FU49 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
SH3D21A4FU49 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.41■■□□□ 1.18
SH3D21A4FU49 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SH3D21A4FU49 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SH3D21A4FU49 RNF126P1-201ENST00000567452 1320 ntBASIC22.41■■□□□ 1.18
SH3D21A4FU49 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.41■■□□□ 1.18
SH3D21A4FU49 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SH3D21A4FU49 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SH3D21A4FU49 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SH3D21A4FU49 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
SH3D21A4FU49 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.4■■□□□ 1.18
SH3D21A4FU49 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.4■■□□□ 1.18
SH3D21A4FU49 ABHD17AP5-201ENST00000580133 923 ntBASIC22.4■■□□□ 1.18
SH3D21A4FU49 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SH3D21A4FU49 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
SH3D21A4FU49 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
SH3D21A4FU49 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SH3D21A4FU49 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.39■■□□□ 1.17
SH3D21A4FU49 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SH3D21A4FU49 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
SH3D21A4FU49 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
SH3D21A4FU49 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.38■■□□□ 1.17
SH3D21A4FU49 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SH3D21A4FU49 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SH3D21A4FU49 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SH3D21A4FU49 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SH3D21A4FU49 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SH3D21A4FU49 AC022413.1-201ENST00000624602 984 ntBASIC22.37■■□□□ 1.17
SH3D21A4FU49 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SH3D21A4FU49 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
SH3D21A4FU49 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
SH3D21A4FU49 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.36■■□□□ 1.17
SH3D21A4FU49 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.36■■□□□ 1.17
SH3D21A4FU49 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.36■■□□□ 1.17
SH3D21A4FU49 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SH3D21A4FU49 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.36■■□□□ 1.17
SH3D21A4FU49 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.36■■□□□ 1.17
SH3D21A4FU49 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SH3D21A4FU49 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SH3D21A4FU49 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SH3D21A4FU49 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
SH3D21A4FU49 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
SH3D21A4FU49 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SH3D21A4FU49 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
SH3D21A4FU49 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SH3D21A4FU49 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
SH3D21A4FU49 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SH3D21A4FU49 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SH3D21A4FU49 AC110285.7-201ENST00000624417 1536 ntBASIC22.35■■□□□ 1.17
SH3D21A4FU49 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SH3D21A4FU49 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SH3D21A4FU49 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SH3D21A4FU49 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SH3D21A4FU49 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SH3D21A4FU49 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SH3D21A4FU49 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SH3D21A4FU49 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH3D21A4FU49 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH3D21A4FU49 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH3D21A4FU49 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH3D21A4FU49 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SH3D21A4FU49 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SH3D21A4FU49 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.32■■□□□ 1.16
SH3D21A4FU49 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms