Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV27A0A0K0K1C4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV27A0A0K0K1C4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV27A0A0K0K1C4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV27A0A0K0K1C4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV27A0A0K0K1C4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV27A0A0K0K1C4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV27A0A0K0K1C4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV27A0A0K0K1C4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV27A0A0K0K1C4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV27A0A0K0K1C4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRBV27A0A0K0K1C4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV27A0A0K0K1C4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV27A0A0K0K1C4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV27A0A0K0K1C4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV27A0A0K0K1C4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV27A0A0K0K1C4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV27A0A0K0K1C4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV27A0A0K0K1C4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRBV27A0A0K0K1C4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV27A0A0K0K1C4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV27A0A0K0K1C4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV27A0A0K0K1C4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV27A0A0K0K1C4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV27A0A0K0K1C4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV27A0A0K0K1C4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRBV27A0A0K0K1C4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV27A0A0K0K1C4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV27A0A0K0K1C4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV27A0A0K0K1C4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV27A0A0K0K1C4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV27A0A0K0K1C4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.14■□□□□ 0.33
TRBV27A0A0K0K1C4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV27A0A0K0K1C4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV27A0A0K0K1C4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV27A0A0K0K1C4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV27A0A0K0K1C4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.14■□□□□ 0.33
TRBV27A0A0K0K1C4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV27A0A0K0K1C4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRBV27A0A0K0K1C4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV27A0A0K0K1C4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV27A0A0K0K1C4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV27A0A0K0K1C4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV27A0A0K0K1C4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV27A0A0K0K1C4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV27A0A0K0K1C4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV27A0A0K0K1C4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRBV27A0A0K0K1C4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TRBV27A0A0K0K1C4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV27A0A0K0K1C4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV27A0A0K0K1C4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV27A0A0K0K1C4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV27A0A0K0K1C4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV27A0A0K0K1C4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV27A0A0K0K1C4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV27A0A0K0K1C4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV27A0A0K0K1C4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBV27A0A0K0K1C4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV27A0A0K0K1C4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV27A0A0K0K1C4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV27A0A0K0K1C4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.11■□□□□ 0.33
TRBV27A0A0K0K1C4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.11■□□□□ 0.33
TRBV27A0A0K0K1C4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV27A0A0K0K1C4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV27A0A0K0K1C4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV27A0A0K0K1C4 AC096887.2-201ENST00000623443 1957 ntBASIC17.11■□□□□ 0.33
TRBV27A0A0K0K1C4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV27A0A0K0K1C4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBV27A0A0K0K1C4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV27A0A0K0K1C4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV27A0A0K0K1C4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV27A0A0K0K1C4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV27A0A0K0K1C4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV27A0A0K0K1C4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
TRBV27A0A0K0K1C4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
TRBV27A0A0K0K1C4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV27A0A0K0K1C4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
TRBV27A0A0K0K1C4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV27A0A0K0K1C4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRBV27A0A0K0K1C4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV27A0A0K0K1C4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRBV27A0A0K0K1C4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.09■□□□□ 0.33
TRBV27A0A0K0K1C4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV27A0A0K0K1C4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV27A0A0K0K1C4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV27A0A0K0K1C4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV27A0A0K0K1C4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV27A0A0K0K1C4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.09■□□□□ 0.33
TRBV27A0A0K0K1C4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRBV27A0A0K0K1C4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV27A0A0K0K1C4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV27A0A0K0K1C4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV27A0A0K0K1C4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.08■□□□□ 0.33
TRBV27A0A0K0K1C4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV27A0A0K0K1C4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
TRBV27A0A0K0K1C4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV27A0A0K0K1C4 AP006261.1-201ENST00000584783 668 ntBASIC17.08■□□□□ 0.32
TRBV27A0A0K0K1C4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.08■□□□□ 0.32
TRBV27A0A0K0K1C4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV27A0A0K0K1C4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms