Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC163A0A0D9SF12 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC163A0A0D9SF12 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.55■■□□□ 1.52
CCDC163A0A0D9SF12 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.55■■□□□ 1.52
CCDC163A0A0D9SF12 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.55■■□□□ 1.52
CCDC163A0A0D9SF12 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC163A0A0D9SF12 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC163A0A0D9SF12 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
CCDC163A0A0D9SF12 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC163A0A0D9SF12 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC163A0A0D9SF12 AC008406.3-201ENST00000620001 1374 ntBASIC24.54■■□□□ 1.52
CCDC163A0A0D9SF12 WHAMMP3-201ENST00000611636 1609 ntBASIC24.53■■□□□ 1.52
CCDC163A0A0D9SF12 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC163A0A0D9SF12 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.53■■□□□ 1.52
CCDC163A0A0D9SF12 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC163A0A0D9SF12 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.53■■□□□ 1.52
CCDC163A0A0D9SF12 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
CCDC163A0A0D9SF12 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.52■■□□□ 1.52
CCDC163A0A0D9SF12 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.52■■□□□ 1.52
CCDC163A0A0D9SF12 AC022616.5-201ENST00000518796 181 ntBASIC24.52■■□□□ 1.52
CCDC163A0A0D9SF12 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC163A0A0D9SF12 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC163A0A0D9SF12 KRT18P10-201ENST00000388836 1287 ntBASIC24.51■■□□□ 1.51
CCDC163A0A0D9SF12 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC163A0A0D9SF12 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC163A0A0D9SF12 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC163A0A0D9SF12 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC163A0A0D9SF12 KRT125P-201ENST00000546827 989 ntBASIC24.5■■□□□ 1.51
CCDC163A0A0D9SF12 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.5■■□□□ 1.51
CCDC163A0A0D9SF12 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC163A0A0D9SF12 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC163A0A0D9SF12 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC163A0A0D9SF12 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.49■■□□□ 1.51
CCDC163A0A0D9SF12 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.49■■□□□ 1.51
CCDC163A0A0D9SF12 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC163A0A0D9SF12 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC163A0A0D9SF12 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
CCDC163A0A0D9SF12 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC163A0A0D9SF12 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
CCDC163A0A0D9SF12 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC163A0A0D9SF12 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.47■■□□□ 1.51
CCDC163A0A0D9SF12 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC163A0A0D9SF12 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC163A0A0D9SF12 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC163A0A0D9SF12 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.46■■□□□ 1.51
CCDC163A0A0D9SF12 BX664725.1-201ENST00000438252 379 ntBASIC24.46■■□□□ 1.51
CCDC163A0A0D9SF12 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.46■■□□□ 1.51
CCDC163A0A0D9SF12 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.46■■□□□ 1.51
CCDC163A0A0D9SF12 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCDC163A0A0D9SF12 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.45■■□□□ 1.5
CCDC163A0A0D9SF12 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCDC163A0A0D9SF12 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC163A0A0D9SF12 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC163A0A0D9SF12 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC163A0A0D9SF12 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
CCDC163A0A0D9SF12 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
CCDC163A0A0D9SF12 MIR4787-201ENST00000607364 84 ntBASIC24.44■■□□□ 1.5
CCDC163A0A0D9SF12 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.44■■□□□ 1.5
CCDC163A0A0D9SF12 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC163A0A0D9SF12 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC163A0A0D9SF12 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
CCDC163A0A0D9SF12 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.43■■□□□ 1.5
CCDC163A0A0D9SF12 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC163A0A0D9SF12 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC163A0A0D9SF12 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
CCDC163A0A0D9SF12 MIR935-201ENST00000401179 91 ntBASIC24.43■■□□□ 1.5
CCDC163A0A0D9SF12 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.43■■□□□ 1.5
CCDC163A0A0D9SF12 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.43■■□□□ 1.5
CCDC163A0A0D9SF12 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC163A0A0D9SF12 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.43■■□□□ 1.5
CCDC163A0A0D9SF12 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC163A0A0D9SF12 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC163A0A0D9SF12 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC163A0A0D9SF12 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC163A0A0D9SF12 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CCDC163A0A0D9SF12 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC163A0A0D9SF12 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
CCDC163A0A0D9SF12 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.41■■□□□ 1.5
CCDC163A0A0D9SF12 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.41■■□□□ 1.5
CCDC163A0A0D9SF12 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC163A0A0D9SF12 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.41■■□□□ 1.5
CCDC163A0A0D9SF12 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC163A0A0D9SF12 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC163A0A0D9SF12 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC163A0A0D9SF12 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC163A0A0D9SF12 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC24.4■■□□□ 1.5
CCDC163A0A0D9SF12 KRT18P24-201ENST00000344739 1156 ntBASIC24.4■■□□□ 1.5
CCDC163A0A0D9SF12 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC163A0A0D9SF12 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCDC163A0A0D9SF12 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.5
CCDC163A0A0D9SF12 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.39■■□□□ 1.49
CCDC163A0A0D9SF12 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.39■■□□□ 1.49
CCDC163A0A0D9SF12 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC163A0A0D9SF12 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC163A0A0D9SF12 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.38■■□□□ 1.49
CCDC163A0A0D9SF12 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC163A0A0D9SF12 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC24.38■■□□□ 1.49
CCDC163A0A0D9SF12 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC163A0A0D9SF12 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.37■■□□□ 1.49
CCDC163A0A0D9SF12 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms