Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
TRAV25A0A0B4J276 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV25A0A0B4J276 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV25A0A0B4J276 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV25A0A0B4J276 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV25A0A0B4J276 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV25A0A0B4J276 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRAV25A0A0B4J276 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV25A0A0B4J276 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV25A0A0B4J276 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV25A0A0B4J276 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV25A0A0B4J276 AC009831.1-201ENST00000580420 1582 ntBASIC18.3■□□□□ 0.52
TRAV25A0A0B4J276 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV25A0A0B4J276 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV25A0A0B4J276 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV25A0A0B4J276 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV25A0A0B4J276 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV25A0A0B4J276 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAV25A0A0B4J276 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
TRAV25A0A0B4J276 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV25A0A0B4J276 U85056.1-201ENST00000616429 682 ntBASIC18.28■□□□□ 0.52
TRAV25A0A0B4J276 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV25A0A0B4J276 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TRAV25A0A0B4J276 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV25A0A0B4J276 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
TRAV25A0A0B4J276 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV25A0A0B4J276 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV25A0A0B4J276 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV25A0A0B4J276 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
TRAV25A0A0B4J276 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV25A0A0B4J276 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV25A0A0B4J276 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV25A0A0B4J276 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV25A0A0B4J276 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV25A0A0B4J276 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV25A0A0B4J276 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV25A0A0B4J276 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV25A0A0B4J276 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV25A0A0B4J276 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV25A0A0B4J276 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV25A0A0B4J276 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
TRAV25A0A0B4J276 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV25A0A0B4J276 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV25A0A0B4J276 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRAV25A0A0B4J276 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.25■□□□□ 0.51
TRAV25A0A0B4J276 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV25A0A0B4J276 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRAV25A0A0B4J276 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV25A0A0B4J276 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV25A0A0B4J276 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TRAV25A0A0B4J276 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.24■□□□□ 0.51
TRAV25A0A0B4J276 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV25A0A0B4J276 AL121749.1-202ENST00000609313 2153 ntBASIC18.24■□□□□ 0.51
TRAV25A0A0B4J276 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRAV25A0A0B4J276 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV25A0A0B4J276 KRT18P10-201ENST00000388836 1287 ntBASIC18.24■□□□□ 0.51
TRAV25A0A0B4J276 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV25A0A0B4J276 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV25A0A0B4J276 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV25A0A0B4J276 AL592293.1-201ENST00000502889 1188 ntBASIC18.24■□□□□ 0.51
TRAV25A0A0B4J276 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV25A0A0B4J276 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV25A0A0B4J276 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV25A0A0B4J276 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
TRAV25A0A0B4J276 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV25A0A0B4J276 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV25A0A0B4J276 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV25A0A0B4J276 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV25A0A0B4J276 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV25A0A0B4J276 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV25A0A0B4J276 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
TRAV25A0A0B4J276 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV25A0A0B4J276 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV25A0A0B4J276 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV25A0A0B4J276 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRAV25A0A0B4J276 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV25A0A0B4J276 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV25A0A0B4J276 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV25A0A0B4J276 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV25A0A0B4J276 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV25A0A0B4J276 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV25A0A0B4J276 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV25A0A0B4J276 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV25A0A0B4J276 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV25A0A0B4J276 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRAV25A0A0B4J276 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TRAV25A0A0B4J276 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV25A0A0B4J276 KRT18P60-201ENST00000312876 1297 ntBASIC18.21■□□□□ 0.51
TRAV25A0A0B4J276 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV25A0A0B4J276 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV25A0A0B4J276 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRAV25A0A0B4J276 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV25A0A0B4J276 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV25A0A0B4J276 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV25A0A0B4J276 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV25A0A0B4J276 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV25A0A0B4J276 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV25A0A0B4J276 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRAV25A0A0B4J276 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV25A0A0B4J276 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms