Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TRAV24A0A0B4J272 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV24A0A0B4J272 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV24A0A0B4J272 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV24A0A0B4J272 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.45■□□□□ 0.87
TRAV24A0A0B4J272 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV24A0A0B4J272 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
TRAV24A0A0B4J272 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV24A0A0B4J272 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TRAV24A0A0B4J272 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV24A0A0B4J272 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV24A0A0B4J272 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.44■□□□□ 0.86
TRAV24A0A0B4J272 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TRAV24A0A0B4J272 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV24A0A0B4J272 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.44■□□□□ 0.86
TRAV24A0A0B4J272 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TRAV24A0A0B4J272 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.44■□□□□ 0.86
TRAV24A0A0B4J272 AC010501.1-201ENST00000606270 1962 ntBASIC20.44■□□□□ 0.86
TRAV24A0A0B4J272 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV24A0A0B4J272 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.43■□□□□ 0.86
TRAV24A0A0B4J272 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV24A0A0B4J272 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV24A0A0B4J272 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV24A0A0B4J272 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV24A0A0B4J272 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRAV24A0A0B4J272 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV24A0A0B4J272 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV24A0A0B4J272 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV24A0A0B4J272 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV24A0A0B4J272 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV24A0A0B4J272 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV24A0A0B4J272 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
TRAV24A0A0B4J272 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV24A0A0B4J272 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
TRAV24A0A0B4J272 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV24A0A0B4J272 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV24A0A0B4J272 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.4■□□□□ 0.86
TRAV24A0A0B4J272 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV24A0A0B4J272 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TRAV24A0A0B4J272 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV24A0A0B4J272 AC126177.7-201ENST00000547904 679 ntBASIC20.4■□□□□ 0.86
TRAV24A0A0B4J272 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.4■□□□□ 0.86
TRAV24A0A0B4J272 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV24A0A0B4J272 MIR7108-201ENST00000614319 87 ntBASIC20.4■□□□□ 0.86
TRAV24A0A0B4J272 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRAV24A0A0B4J272 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAV24A0A0B4J272 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAV24A0A0B4J272 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.39■□□□□ 0.85
TRAV24A0A0B4J272 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV24A0A0B4J272 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TRAV24A0A0B4J272 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV24A0A0B4J272 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV24A0A0B4J272 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV24A0A0B4J272 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.38■□□□□ 0.85
TRAV24A0A0B4J272 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TRAV24A0A0B4J272 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV24A0A0B4J272 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TRAV24A0A0B4J272 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV24A0A0B4J272 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.37■□□□□ 0.85
TRAV24A0A0B4J272 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV24A0A0B4J272 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV24A0A0B4J272 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAV24A0A0B4J272 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV24A0A0B4J272 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV24A0A0B4J272 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV24A0A0B4J272 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV24A0A0B4J272 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TRAV24A0A0B4J272 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV24A0A0B4J272 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV24A0A0B4J272 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.35■□□□□ 0.85
TRAV24A0A0B4J272 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TRAV24A0A0B4J272 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TRAV24A0A0B4J272 AC135731.1-201ENST00000569415 2548 ntBASIC20.34■□□□□ 0.85
TRAV24A0A0B4J272 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAV24A0A0B4J272 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAV24A0A0B4J272 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.34■□□□□ 0.85
TRAV24A0A0B4J272 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAV24A0A0B4J272 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV24A0A0B4J272 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV24A0A0B4J272 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV24A0A0B4J272 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV24A0A0B4J272 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV24A0A0B4J272 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV24A0A0B4J272 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV24A0A0B4J272 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV24A0A0B4J272 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.33■□□□□ 0.84
TRAV24A0A0B4J272 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV24A0A0B4J272 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TRAV24A0A0B4J272 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.32■□□□□ 0.84
TRAV24A0A0B4J272 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.32■□□□□ 0.84
TRAV24A0A0B4J272 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.32■□□□□ 0.84
TRAV24A0A0B4J272 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV24A0A0B4J272 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRAV24A0A0B4J272 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV24A0A0B4J272 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TRAV24A0A0B4J272 AC096887.2-201ENST00000623443 1957 ntBASIC20.31■□□□□ 0.84
TRAV24A0A0B4J272 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV24A0A0B4J272 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV24A0A0B4J272 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.3■□□□□ 0.84
TRAV24A0A0B4J272 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms