Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV10A0A0B4J240 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV10A0A0B4J240 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV10A0A0B4J240 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
TRAV10A0A0B4J240 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV10A0A0B4J240 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRAV10A0A0B4J240 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRAV10A0A0B4J240 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV10A0A0B4J240 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV10A0A0B4J240 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRAV10A0A0B4J240 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV10A0A0B4J240 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV10A0A0B4J240 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV10A0A0B4J240 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV10A0A0B4J240 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV10A0A0B4J240 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV10A0A0B4J240 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV10A0A0B4J240 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV10A0A0B4J240 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV10A0A0B4J240 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV10A0A0B4J240 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV10A0A0B4J240 AC010980.1-201ENST00000587192 1142 ntBASIC17.18■□□□□ 0.34
TRAV10A0A0B4J240 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
TRAV10A0A0B4J240 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV10A0A0B4J240 AL449106.1-201ENST00000608517 1980 ntBASIC17.18■□□□□ 0.34
TRAV10A0A0B4J240 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV10A0A0B4J240 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRAV10A0A0B4J240 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV10A0A0B4J240 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV10A0A0B4J240 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV10A0A0B4J240 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.17■□□□□ 0.34
TRAV10A0A0B4J240 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV10A0A0B4J240 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV10A0A0B4J240 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV10A0A0B4J240 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
TRAV10A0A0B4J240 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV10A0A0B4J240 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
TRAV10A0A0B4J240 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV10A0A0B4J240 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV10A0A0B4J240 YBX1P4-201ENST00000392794 808 ntBASIC17.16■□□□□ 0.34
TRAV10A0A0B4J240 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV10A0A0B4J240 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV10A0A0B4J240 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV10A0A0B4J240 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV10A0A0B4J240 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV10A0A0B4J240 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV10A0A0B4J240 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV10A0A0B4J240 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
TRAV10A0A0B4J240 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRAV10A0A0B4J240 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV10A0A0B4J240 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.14■□□□□ 0.33
TRAV10A0A0B4J240 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV10A0A0B4J240 BX255925.1-201ENST00000566954 1854 ntBASIC17.14■□□□□ 0.33
TRAV10A0A0B4J240 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV10A0A0B4J240 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV10A0A0B4J240 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.14■□□□□ 0.33
TRAV10A0A0B4J240 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRAV10A0A0B4J240 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV10A0A0B4J240 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV10A0A0B4J240 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRAV10A0A0B4J240 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV10A0A0B4J240 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV10A0A0B4J240 KRT18P10-201ENST00000388836 1287 ntBASIC17.13■□□□□ 0.33
TRAV10A0A0B4J240 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV10A0A0B4J240 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV10A0A0B4J240 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV10A0A0B4J240 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV10A0A0B4J240 KRT8P33-201ENST00000508125 1423 ntBASIC17.13■□□□□ 0.33
TRAV10A0A0B4J240 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV10A0A0B4J240 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
TRAV10A0A0B4J240 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
TRAV10A0A0B4J240 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRAV10A0A0B4J240 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV10A0A0B4J240 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV10A0A0B4J240 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRAV10A0A0B4J240 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TRAV10A0A0B4J240 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV10A0A0B4J240 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV10A0A0B4J240 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRAV10A0A0B4J240 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV10A0A0B4J240 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV10A0A0B4J240 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV10A0A0B4J240 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV10A0A0B4J240 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV10A0A0B4J240 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.1■□□□□ 0.33
TRAV10A0A0B4J240 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV10A0A0B4J240 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.1■□□□□ 0.33
TRAV10A0A0B4J240 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
TRAV10A0A0B4J240 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV10A0A0B4J240 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV10A0A0B4J240 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV10A0A0B4J240 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV10A0A0B4J240 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV10A0A0B4J240 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV10A0A0B4J240 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV10A0A0B4J240 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV10A0A0B4J240 AC142472.1-201ENST00000612013 1741 ntBASIC17.08■□□□□ 0.32
TRAV10A0A0B4J240 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV10A0A0B4J240 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV10A0A0B4J240 AC142086.6-201ENST00000621154 1765 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms