Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV16A0A0A6YYK6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV16A0A0A6YYK6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV16A0A0A6YYK6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV16A0A0A6YYK6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV16A0A0A6YYK6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV16A0A0A6YYK6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV16A0A0A6YYK6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
TRAV16A0A0A6YYK6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV16A0A0A6YYK6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV16A0A0A6YYK6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV16A0A0A6YYK6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV16A0A0A6YYK6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV16A0A0A6YYK6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRAV16A0A0A6YYK6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV16A0A0A6YYK6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV16A0A0A6YYK6 AC021231.2-201ENST00000594613 730 ntBASIC16.77■□□□□ 0.28
TRAV16A0A0A6YYK6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV16A0A0A6YYK6 LINC00273-201ENST00000539813 1452 ntBASIC16.77■□□□□ 0.28
TRAV16A0A0A6YYK6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV16A0A0A6YYK6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV16A0A0A6YYK6 LINC00543-201ENST00000567234 1845 ntBASIC16.77■□□□□ 0.27
TRAV16A0A0A6YYK6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV16A0A0A6YYK6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV16A0A0A6YYK6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
TRAV16A0A0A6YYK6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV16A0A0A6YYK6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
TRAV16A0A0A6YYK6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV16A0A0A6YYK6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC16.76■□□□□ 0.27
TRAV16A0A0A6YYK6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC16.76■□□□□ 0.27
TRAV16A0A0A6YYK6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV16A0A0A6YYK6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRAV16A0A0A6YYK6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV16A0A0A6YYK6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRAV16A0A0A6YYK6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV16A0A0A6YYK6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRAV16A0A0A6YYK6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV16A0A0A6YYK6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV16A0A0A6YYK6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC16.75■□□□□ 0.27
TRAV16A0A0A6YYK6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAV16A0A0A6YYK6 AC092803.2-201ENST00000564287 1899 ntBASIC16.75■□□□□ 0.27
TRAV16A0A0A6YYK6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV16A0A0A6YYK6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRAV16A0A0A6YYK6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV16A0A0A6YYK6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV16A0A0A6YYK6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV16A0A0A6YYK6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRAV16A0A0A6YYK6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV16A0A0A6YYK6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRAV16A0A0A6YYK6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV16A0A0A6YYK6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV16A0A0A6YYK6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV16A0A0A6YYK6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC16.74■□□□□ 0.27
TRAV16A0A0A6YYK6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV16A0A0A6YYK6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRAV16A0A0A6YYK6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV16A0A0A6YYK6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAV16A0A0A6YYK6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
TRAV16A0A0A6YYK6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRAV16A0A0A6YYK6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV16A0A0A6YYK6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV16A0A0A6YYK6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV16A0A0A6YYK6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV16A0A0A6YYK6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV16A0A0A6YYK6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV16A0A0A6YYK6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV16A0A0A6YYK6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV16A0A0A6YYK6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV16A0A0A6YYK6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRAV16A0A0A6YYK6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV16A0A0A6YYK6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV16A0A0A6YYK6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV16A0A0A6YYK6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV16A0A0A6YYK6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV16A0A0A6YYK6 AC133561.1-201ENST00000568600 2415 ntBASIC16.71■□□□□ 0.27
TRAV16A0A0A6YYK6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV16A0A0A6YYK6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV16A0A0A6YYK6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV16A0A0A6YYK6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV16A0A0A6YYK6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
TRAV16A0A0A6YYK6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRAV16A0A0A6YYK6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TRAV16A0A0A6YYK6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRAV16A0A0A6YYK6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRAV16A0A0A6YYK6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV16A0A0A6YYK6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV16A0A0A6YYK6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV16A0A0A6YYK6 PKD1P6-201ENST00000343738 4769 ntBASIC16.7■□□□□ 0.26
TRAV16A0A0A6YYK6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV16A0A0A6YYK6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV16A0A0A6YYK6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV16A0A0A6YYK6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV16A0A0A6YYK6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV16A0A0A6YYK6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV16A0A0A6YYK6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV16A0A0A6YYK6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TRAV16A0A0A6YYK6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV16A0A0A6YYK6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.69■□□□□ 0.26
TRAV16A0A0A6YYK6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV16A0A0A6YYK6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms