Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV26-1A0A087WT03 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRAV26-1A0A087WT03 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV26-1A0A087WT03 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV26-1A0A087WT03 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV26-1A0A087WT03 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRAV26-1A0A087WT03 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV26-1A0A087WT03 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV26-1A0A087WT03 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV26-1A0A087WT03 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV26-1A0A087WT03 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV26-1A0A087WT03 AC060814.1-201ENST00000554326 538 ntBASIC17.41■□□□□ 0.38
TRAV26-1A0A087WT03 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV26-1A0A087WT03 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV26-1A0A087WT03 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV26-1A0A087WT03 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV26-1A0A087WT03 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV26-1A0A087WT03 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV26-1A0A087WT03 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV26-1A0A087WT03 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRAV26-1A0A087WT03 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV26-1A0A087WT03 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV26-1A0A087WT03 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV26-1A0A087WT03 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.39■□□□□ 0.37
TRAV26-1A0A087WT03 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV26-1A0A087WT03 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV26-1A0A087WT03 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV26-1A0A087WT03 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV26-1A0A087WT03 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV26-1A0A087WT03 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV26-1A0A087WT03 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.38■□□□□ 0.37
TRAV26-1A0A087WT03 HSD17B1P1-201ENST00000590052 955 ntBASIC17.38■□□□□ 0.37
TRAV26-1A0A087WT03 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRAV26-1A0A087WT03 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV26-1A0A087WT03 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRAV26-1A0A087WT03 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV26-1A0A087WT03 AL449106.1-201ENST00000608517 1980 ntBASIC17.37■□□□□ 0.37
TRAV26-1A0A087WT03 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV26-1A0A087WT03 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV26-1A0A087WT03 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
TRAV26-1A0A087WT03 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV26-1A0A087WT03 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV26-1A0A087WT03 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.36■□□□□ 0.37
TRAV26-1A0A087WT03 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV26-1A0A087WT03 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV26-1A0A087WT03 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV26-1A0A087WT03 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRAV26-1A0A087WT03 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV26-1A0A087WT03 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TRAV26-1A0A087WT03 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV26-1A0A087WT03 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TRAV26-1A0A087WT03 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV26-1A0A087WT03 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV26-1A0A087WT03 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRAV26-1A0A087WT03 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV26-1A0A087WT03 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRAV26-1A0A087WT03 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV26-1A0A087WT03 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV26-1A0A087WT03 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TRAV26-1A0A087WT03 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV26-1A0A087WT03 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV26-1A0A087WT03 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV26-1A0A087WT03 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV26-1A0A087WT03 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV26-1A0A087WT03 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
TRAV26-1A0A087WT03 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV26-1A0A087WT03 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV26-1A0A087WT03 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV26-1A0A087WT03 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV26-1A0A087WT03 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV26-1A0A087WT03 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV26-1A0A087WT03 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TRAV26-1A0A087WT03 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAV26-1A0A087WT03 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV26-1A0A087WT03 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAV26-1A0A087WT03 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRAV26-1A0A087WT03 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TRAV26-1A0A087WT03 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV26-1A0A087WT03 RNF126P1-201ENST00000567452 1320 ntBASIC17.31■□□□□ 0.36
TRAV26-1A0A087WT03 AC092296.2-201ENST00000589470 999 ntBASIC17.31■□□□□ 0.36
TRAV26-1A0A087WT03 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV26-1A0A087WT03 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV26-1A0A087WT03 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV26-1A0A087WT03 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV26-1A0A087WT03 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV26-1A0A087WT03 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV26-1A0A087WT03 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV26-1A0A087WT03 AL157400.5-201ENST00000507624 621 ntBASIC17.3■□□□□ 0.36
TRAV26-1A0A087WT03 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV26-1A0A087WT03 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV26-1A0A087WT03 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV26-1A0A087WT03 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV26-1A0A087WT03 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV26-1A0A087WT03 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV26-1A0A087WT03 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV26-1A0A087WT03 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV26-1A0A087WT03 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV26-1A0A087WT03 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV26-1A0A087WT03 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRAV26-1A0A087WT03 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms