Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 AC114341.1-201ENST00000618070 349 ntBASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 AC009949.1-201ENST00000623048 1830 ntBASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLCA3PQ9Y6N3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 AC007967.3-201ENST00000434308 558 ntBASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 DUSP5P1-201ENST00000441325 1139 ntBASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 KRT18P31-201ENST00000506277 1292 ntBASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 AC124067.4-201ENST00000519691 2379 ntBASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCA3PQ9Y6N3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
CLCA3PQ9Y6N3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CLCA3PQ9Y6N3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CLCA3PQ9Y6N3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCA3PQ9Y6N3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.58■□□□□ 0.25
CLCA3PQ9Y6N3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCA3PQ9Y6N3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCA3PQ9Y6N3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCA3PQ9Y6N3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 FAM220CP-201ENST00000395253 831 ntBASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 TSPY19P-201ENST00000418461 509 ntBASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 DDX43P3-201ENST00000441064 443 ntBASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 TSPY18P-201ENST00000441642 509 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms