Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 AC097376.2-205ENST00000610159 5334 ntBASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 AP002414.2-201ENST00000591780 3365 ntBASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 AC078925.2-201ENST00000624013 1973 ntBASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 AC099343.3-201ENST00000605834 2503 ntBASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 OR2I1P-210ENST00000642037 4691 ntBASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 AC027612.3-201ENST00000413684 1047 ntBASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms