Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 ARMC10P1-201ENST00000313754 855 ntBASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 AC116562.2-201ENST00000507042 360 ntBASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 AC097488.1-201ENST00000507834 756 ntBASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 AL024508.2-201ENST00000607749 1894 ntBASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGB1Q9Y5G3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGB1Q9Y5G3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.08■□□□□ 0.17
PCDHGB1Q9Y5G3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGB1Q9Y5G3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGB1Q9Y5G3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGB1Q9Y5G3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGB1Q9Y5G3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGB1Q9Y5G3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
PCDHGB1Q9Y5G3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGB1Q9Y5G3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 AC116407.2-201ENST00000613639 860 ntBASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 AC007950.2-201ENST00000615045 2347 ntBASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 AC132938.6-201ENST00000623828 1655 ntBASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB1Q9Y5G3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 AL513523.2-202ENST00000427283 2040 ntBASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 KRT18P35-201ENST00000510488 1269 ntBASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 AC104390.1-201ENST00000555663 520 ntBASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 WWOX-216ENST00000569818 525 ntBASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms